Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.7□□□□□ -0.22
Ctr9Q62018 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.7□□□□□ -0.22
Ctr9Q62018 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.7□□□□□ -0.22
Ctr9Q62018 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.7□□□□□ -0.22
Ctr9Q62018 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ctr9Q62018 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ctr9Q62018 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.7□□□□□ -0.22
Ctr9Q62018 Gm21092-201ENSMUST00000178995 955 ntBASIC13.7□□□□□ -0.22
Ctr9Q62018 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.7□□□□□ -0.22
Ctr9Q62018 Gm37299-201ENSMUST00000193951 826 ntBASIC13.7□□□□□ -0.22
Ctr9Q62018 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.7□□□□□ -0.22
Ctr9Q62018 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.7□□□□□ -0.22
Ctr9Q62018 Gm8574-201ENSMUST00000203207 924 ntBASIC13.7□□□□□ -0.22
Ctr9Q62018 Snora73b-201ENSMUST00000083419 205 ntBASIC13.7□□□□□ -0.22
Ctr9Q62018 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctr9Q62018 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctr9Q62018 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctr9Q62018 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ctr9Q62018 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ctr9Q62018 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.7□□□□□ -0.22
Ctr9Q62018 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctr9Q62018 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ctr9Q62018 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctr9Q62018 Gm43860-201ENSMUST00000201742 2705 ntBASIC13.7□□□□□ -0.22
Ctr9Q62018 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.69□□□□□ -0.22
Ctr9Q62018 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.69□□□□□ -0.22
Ctr9Q62018 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Gm11667-201ENSMUST00000119828 486 ntBASIC13.69□□□□□ -0.22
Ctr9Q62018 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.69□□□□□ -0.22
Ctr9Q62018 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.69□□□□□ -0.22
Ctr9Q62018 Gm26047-201ENSMUST00000157308 113 ntBASIC13.69□□□□□ -0.22
Ctr9Q62018 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Ctr9Q62018 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Gm26047-202ENSMUST00000198840 115 ntBASIC13.69□□□□□ -0.22
Ctr9Q62018 Gm9463-201ENSMUST00000206707 601 ntBASIC13.69□□□□□ -0.22
Ctr9Q62018 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.69□□□□□ -0.22
Ctr9Q62018 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.69□□□□□ -0.22
Ctr9Q62018 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Gm4978-201ENSMUST00000071565 801 ntBASIC13.69□□□□□ -0.22
Ctr9Q62018 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ctr9Q62018 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.69□□□□□ -0.22
Ctr9Q62018 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.69□□□□□ -0.22
Ctr9Q62018 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ctr9Q62018 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ctr9Q62018 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctr9Q62018 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ctr9Q62018 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 AC166359.1-201ENSMUST00000220243 1871 ntBASIC13.68□□□□□ -0.22
Ctr9Q62018 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Gm16071-201ENSMUST00000119589 793 ntBASIC13.68□□□□□ -0.22
Ctr9Q62018 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.68□□□□□ -0.22
Ctr9Q62018 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.68□□□□□ -0.22
Ctr9Q62018 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.68□□□□□ -0.22
Ctr9Q62018 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ctr9Q62018 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.68□□□□□ -0.22
Ctr9Q62018 Gm17826-201ENSMUST00000189720 798 ntBASIC13.68□□□□□ -0.22
Ctr9Q62018 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.68□□□□□ -0.22
Ctr9Q62018 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ctr9Q62018 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.68□□□□□ -0.22
Ctr9Q62018 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ctr9Q62018 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctr9Q62018 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms