Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Cln3Q61124 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cln3Q61124 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.72□□□□□ -0.37
Cln3Q61124 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.72□□□□□ -0.37
Cln3Q61124 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cln3Q61124 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC12.72□□□□□ -0.37
Cln3Q61124 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.72□□□□□ -0.37
Cln3Q61124 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.72□□□□□ -0.37
Cln3Q61124 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.72□□□□□ -0.37
Cln3Q61124 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC12.72□□□□□ -0.37
Cln3Q61124 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 Gm7525-201ENSMUST00000219425 454 ntBASIC12.72□□□□□ -0.37
Cln3Q61124 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.72□□□□□ -0.37
Cln3Q61124 AC140209.1-201ENSMUST00000227875 284 ntBASIC12.72□□□□□ -0.37
Cln3Q61124 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Cln3Q61124 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cln3Q61124 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cln3Q61124 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.72□□□□□ -0.37
Cln3Q61124 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cln3Q61124 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cln3Q61124 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cln3Q61124 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.71□□□□□ -0.37
Cln3Q61124 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Cln3Q61124 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.71□□□□□ -0.37
Cln3Q61124 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cln3Q61124 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cln3Q61124 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cln3Q61124 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.71□□□□□ -0.37
Cln3Q61124 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cln3Q61124 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cln3Q61124 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cln3Q61124 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cln3Q61124 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cln3Q61124 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cln3Q61124 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cln3Q61124 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cln3Q61124 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Cln3Q61124 Gm12467-201ENSMUST00000117625 745 ntBASIC12.71□□□□□ -0.37
Cln3Q61124 Gm11578-201ENSMUST00000118530 459 ntBASIC12.71□□□□□ -0.37
Cln3Q61124 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cln3Q61124 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.71□□□□□ -0.37
Cln3Q61124 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cln3Q61124 Gm20414-201ENSMUST00000172918 646 ntBASIC12.71□□□□□ -0.37
Cln3Q61124 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cln3Q61124 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cln3Q61124 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.71□□□□□ -0.37
Cln3Q61124 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC12.71□□□□□ -0.37
Cln3Q61124 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.71□□□□□ -0.37
Cln3Q61124 Gm9369-201ENSMUST00000196009 733 ntBASIC12.71□□□□□ -0.37
Cln3Q61124 Gm30946-201ENSMUST00000198288 724 ntBASIC12.71□□□□□ -0.37
Cln3Q61124 AC172027.1-201ENSMUST00000217659 337 ntBASIC12.71□□□□□ -0.37
Cln3Q61124 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cln3Q61124 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cln3Q61124 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cln3Q61124 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cln3Q61124 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cln3Q61124 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.71□□□□□ -0.38
Cln3Q61124 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cln3Q61124 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cln3Q61124 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cln3Q61124 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.71□□□□□ -0.38
Cln3Q61124 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cln3Q61124 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cln3Q61124 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cln3Q61124 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cln3Q61124 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cln3Q61124 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.7□□□□□ -0.38
Cln3Q61124 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.7□□□□□ -0.38
Cln3Q61124 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cln3Q61124 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cln3Q61124 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 Gm12218-201ENSMUST00000117666 399 ntBASIC12.7□□□□□ -0.38
Cln3Q61124 Gm15036-201ENSMUST00000118880 400 ntBASIC12.7□□□□□ -0.38
Cln3Q61124 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC12.7□□□□□ -0.38
Cln3Q61124 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms