Protein–RNA interactions for Protein: Q60722

Tcf4, Transcription factor 4, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcf4Q60722 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tcf4Q60722 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tcf4Q60722 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tcf4Q60722 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tcf4Q60722 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tcf4Q60722 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.05□□□□□ -0.48
Tcf4Q60722 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tcf4Q60722 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Tcf4Q60722 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tcf4Q60722 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tcf4Q60722 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tcf4Q60722 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tcf4Q60722 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Gm12579-201ENSMUST00000118040 783 ntBASIC12.04□□□□□ -0.48
Tcf4Q60722 Gm11439-201ENSMUST00000118598 409 ntBASIC12.04□□□□□ -0.48
Tcf4Q60722 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.04□□□□□ -0.48
Tcf4Q60722 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Gm18734-201ENSMUST00000172937 808 ntBASIC12.04□□□□□ -0.48
Tcf4Q60722 Gm38151-201ENSMUST00000195085 289 ntBASIC12.04□□□□□ -0.48
Tcf4Q60722 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Tcf4Q60722 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.04□□□□□ -0.48
Tcf4Q60722 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.04□□□□□ -0.48
Tcf4Q60722 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.04□□□□□ -0.48
Tcf4Q60722 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.04□□□□□ -0.48
Tcf4Q60722 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tcf4Q60722 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tcf4Q60722 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.04□□□□□ -0.48
Tcf4Q60722 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tcf4Q60722 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Tcf4Q60722 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.03□□□□□ -0.48
Tcf4Q60722 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.03□□□□□ -0.48
Tcf4Q60722 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.03□□□□□ -0.48
Tcf4Q60722 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.03□□□□□ -0.48
Tcf4Q60722 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.03□□□□□ -0.48
Tcf4Q60722 Gm11500-201ENSMUST00000118237 601 ntBASIC12.03□□□□□ -0.48
Tcf4Q60722 Gm8199-201ENSMUST00000121323 823 ntBASIC12.03□□□□□ -0.48
Tcf4Q60722 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Tcf4Q60722 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.03□□□□□ -0.48
Tcf4Q60722 Gm8459-201ENSMUST00000162504 760 ntBASIC12.03□□□□□ -0.48
Tcf4Q60722 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.03□□□□□ -0.48
Tcf4Q60722 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.03□□□□□ -0.48
Tcf4Q60722 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.03□□□□□ -0.48
Tcf4Q60722 Gm18730-201ENSMUST00000218038 343 ntBASIC12.03□□□□□ -0.48
Tcf4Q60722 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Tcf4Q60722 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Tcf4Q60722 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Tcf4Q60722 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Tcf4Q60722 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.03□□□□□ -0.48
Tcf4Q60722 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Tcf4Q60722 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tcf4Q60722 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tcf4Q60722 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tcf4Q60722 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Tcf4Q60722 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Tcf4Q60722 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Tcf4Q60722 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms