Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Gm15131-201ENSMUST00000119124 595 ntBASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Gm12029-201ENSMUST00000120073 832 ntBASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Gm44980-201ENSMUST00000205826 314 ntBASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Gm6722-201ENSMUST00000221586 390 ntBASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Gm10179-201ENSMUST00000086233 688 ntBASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Gm6485-201ENSMUST00000160676 439 ntBASIC13.87□□□□□ -0.19
Vps54Q5SPW0 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Gm24514-201ENSMUST00000174961 285 ntBASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Gm7467-201ENSMUST00000185173 652 ntBASIC13.87□□□□□ -0.19
Vps54Q5SPW0 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Gm44315-201ENSMUST00000203041 219 ntBASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Gm9463-201ENSMUST00000206707 601 ntBASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.87□□□□□ -0.19
Vps54Q5SPW0 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Snora73b-201ENSMUST00000083419 205 ntBASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Gm23105-201ENSMUST00000083719 134 ntBASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps54Q5SPW0 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Gm15374-201ENSMUST00000119313 844 ntBASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Gm23771-201ENSMUST00000178702 110 ntBASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Gm7741-201ENSMUST00000181445 989 ntBASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Gm27910-201ENSMUST00000185004 107 ntBASIC13.86□□□□□ -0.19
Vps54Q5SPW0 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Gm9645-201ENSMUST00000197131 792 ntBASIC13.86□□□□□ -0.19
Vps54Q5SPW0 Gm43520-201ENSMUST00000197996 164 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms