Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Gm12857-201ENSMUST00000117678 592 ntBASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Gm25881-201ENSMUST00000157783 103 ntBASIC12.31□□□□□ -0.44
Syne3Q4FZC9 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Gm16505-201ENSMUST00000179981 232 ntBASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Rps4l-202ENSMUST00000204242 789 ntBASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Gm9797-202ENSMUST00000218003 294 ntBASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Syne3Q4FZC9 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Gm7857-201ENSMUST00000117957 358 ntBASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Gm12196-201ENSMUST00000120954 262 ntBASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Gm16570-201ENSMUST00000161951 436 ntBASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Gm6114-201ENSMUST00000182472 968 ntBASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Syne3Q4FZC9 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Gm11663-201ENSMUST00000117888 290 ntBASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Gm12217-201ENSMUST00000118858 696 ntBASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Gm12501-201ENSMUST00000119163 529 ntBASIC12.29□□□□□ -0.44
Syne3Q4FZC9 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms