Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Usp48Q3V0C5 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Gm3017-201ENSMUST00000203603 1126 ntBASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Gm18460-201ENSMUST00000208088 464 ntBASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Gm45410-201ENSMUST00000211331 1093 ntBASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp48Q3V0C5 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Gm12164-201ENSMUST00000121695 551 ntBASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Gm26989-201ENSMUST00000182608 749 ntBASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Gm9135-201ENSMUST00000182963 990 ntBASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Gm18711-201ENSMUST00000199341 750 ntBASIC14.39□□□□□ -0.11
Usp48Q3V0C5 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp48Q3V0C5 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Gm14274-201ENSMUST00000117182 615 ntBASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Gm12218-201ENSMUST00000117666 399 ntBASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Gm11979-201ENSMUST00000119629 743 ntBASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Gm11660-201ENSMUST00000120955 412 ntBASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Gm24844-201ENSMUST00000158679 127 ntBASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Gm5714-201ENSMUST00000197343 566 ntBASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms