Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Sf3b2Q3UJB0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b2Q3UJB0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b2Q3UJB0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.97□□□□□ -0.01
Sf3b2Q3UJB0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b2Q3UJB0 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Sf3b2Q3UJB0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b2Q3UJB0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b2Q3UJB0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b2Q3UJB0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.97□□□□□ -0.01
Sf3b2Q3UJB0 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b2Q3UJB0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Sf3b2Q3UJB0 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sf3b2Q3UJB0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b2Q3UJB0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Gm23132-201ENSMUST00000104254 132 ntBASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Gm12470-201ENSMUST00000117239 1049 ntBASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Gm14441-201ENSMUST00000121960 540 ntBASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Gm26313-201ENSMUST00000157770 308 ntBASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Gm43866-201ENSMUST00000203894 839 ntBASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Gm6518-201ENSMUST00000208450 342 ntBASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b2Q3UJB0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Sf3b2Q3UJB0 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Sf3b2Q3UJB0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Cd9-ps-201ENSMUST00000174687 650 ntBASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Gm25872-201ENSMUST00000177784 100 ntBASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Gm21778-201ENSMUST00000178779 471 ntBASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Gm5650-201ENSMUST00000209641 598 ntBASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Gm26782-203ENSMUST00000227103 751 ntBASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 AC103672.1-201ENSMUST00000227502 365 ntBASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 AC122035.1-201ENSMUST00000227576 1016 ntBASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b2Q3UJB0 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3b2Q3UJB0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3b2Q3UJB0 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3b2Q3UJB0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Sf3b2Q3UJB0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Sf3b2Q3UJB0 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3b2Q3UJB0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3b2Q3UJB0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3b2Q3UJB0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3b2Q3UJB0 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3b2Q3UJB0 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sf3b2Q3UJB0 Gm23604-201ENSMUST00000104311 132 ntBASIC14.94□□□□□ -0.02
Sf3b2Q3UJB0 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms