Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nhej1Q3KNJ2 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nhej1Q3KNJ2 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.33□□□□□ -0.44
Nhej1Q3KNJ2 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nhej1Q3KNJ2 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Nhej1Q3KNJ2 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nhej1Q3KNJ2 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Nhej1Q3KNJ2 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.33□□□□□ -0.44
Nhej1Q3KNJ2 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nhej1Q3KNJ2 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nhej1Q3KNJ2 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nhej1Q3KNJ2 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.33□□□□□ -0.44
Nhej1Q3KNJ2 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Gm22133-201ENSMUST00000102082 109 ntBASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Gm44651-201ENSMUST00000207343 372 ntBASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Nhej1Q3KNJ2 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Gm12742-201ENSMUST00000117326 410 ntBASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Gm38117-201ENSMUST00000194653 939 ntBASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhej1Q3KNJ2 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms