Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.53□□□□□ -0.4
Col9a2Q07643 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.53□□□□□ -0.4
Col9a2Q07643 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.53□□□□□ -0.4
Col9a2Q07643 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.53□□□□□ -0.4
Col9a2Q07643 Gm29067-201ENSMUST00000190821 470 ntBASIC12.53□□□□□ -0.4
Col9a2Q07643 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Col9a2Q07643 Gm43380-201ENSMUST00000200421 220 ntBASIC12.53□□□□□ -0.4
Col9a2Q07643 Gm35960-201ENSMUST00000202712 767 ntBASIC12.53□□□□□ -0.4
Col9a2Q07643 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.53□□□□□ -0.4
Col9a2Q07643 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.53□□□□□ -0.4
Col9a2Q07643 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.53□□□□□ -0.4
Col9a2Q07643 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.53□□□□□ -0.4
Col9a2Q07643 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.53□□□□□ -0.4
Col9a2Q07643 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.53□□□□□ -0.4
Col9a2Q07643 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a2Q07643 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a2Q07643 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col9a2Q07643 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col9a2Q07643 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col9a2Q07643 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a2Q07643 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a2Q07643 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a2Q07643 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a2Q07643 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a2Q07643 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a2Q07643 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col9a2Q07643 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Col9a2Q07643 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.52□□□□□ -0.4
Col9a2Q07643 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col9a2Q07643 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col9a2Q07643 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.52□□□□□ -0.4
Col9a2Q07643 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col9a2Q07643 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col9a2Q07643 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Col9a2Q07643 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col9a2Q07643 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.52□□□□□ -0.41
Col9a2Q07643 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.52□□□□□ -0.41
Col9a2Q07643 Gm24992-201ENSMUST00000157412 130 ntBASIC12.52□□□□□ -0.41
Col9a2Q07643 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Gm20392-201ENSMUST00000173047 701 ntBASIC12.52□□□□□ -0.41
Col9a2Q07643 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.52□□□□□ -0.41
Col9a2Q07643 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.52□□□□□ -0.41
Col9a2Q07643 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.52□□□□□ -0.41
Col9a2Q07643 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.52□□□□□ -0.41
Col9a2Q07643 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.52□□□□□ -0.41
Col9a2Q07643 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.52□□□□□ -0.41
Col9a2Q07643 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Col9a2Q07643 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.52□□□□□ -0.41
Col9a2Q07643 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.52□□□□□ -0.41
Col9a2Q07643 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Col9a2Q07643 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.52□□□□□ -0.41
Col9a2Q07643 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.52□□□□□ -0.41
Col9a2Q07643 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.52□□□□□ -0.41
Col9a2Q07643 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Col9a2Q07643 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col9a2Q07643 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a2Q07643 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a2Q07643 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a2Q07643 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a2Q07643 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a2Q07643 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a2Q07643 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a2Q07643 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a2Q07643 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.51□□□□□ -0.41
Col9a2Q07643 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Col9a2Q07643 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a2Q07643 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a2Q07643 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a2Q07643 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.51□□□□□ -0.41
Col9a2Q07643 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Col9a2Q07643 Pck2-205ENSMUST00000226352 2784 ntBASIC12.51□□□□□ -0.41
Col9a2Q07643 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Col9a2Q07643 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col9a2Q07643 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a2Q07643 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a2Q07643 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a2Q07643 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col9a2Q07643 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col9a2Q07643 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms