Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm44412-201ENSMUST00000203018 294 ntBASIC11.79□□□□□ -0.52
Col9a1Q05722 Gm44712-201ENSMUST00000206250 1076 ntBASIC11.79□□□□□ -0.52
Col9a1Q05722 Gm18466-201ENSMUST00000209147 499 ntBASIC11.79□□□□□ -0.52
Col9a1Q05722 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
Col9a1Q05722 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC11.79□□□□□ -0.52
Col9a1Q05722 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC11.79□□□□□ -0.52
Col9a1Q05722 AC158631.2-201ENSMUST00000219999 478 ntBASIC11.79□□□□□ -0.52
Col9a1Q05722 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.79□□□□□ -0.52
Col9a1Q05722 AC154627.1-201ENSMUST00000228799 1286 ntBASIC11.79□□□□□ -0.52
Col9a1Q05722 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Col9a1Q05722 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Col9a1Q05722 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col9a1Q05722 Akap7-202ENSMUST00000095779 919 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Col9a1Q05722 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col9a1Q05722 Gm43670-201ENSMUST00000199047 1767 ntBASIC11.79□□□□□ -0.52
Col9a1Q05722 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.79□□□□□ -0.52
Col9a1Q05722 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.79□□□□□ -0.52
Col9a1Q05722 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Gm45263-201ENSMUST00000210377 1375 ntBASIC11.79□□□□□ -0.52
Col9a1Q05722 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Col9a1Q05722 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Col9a1Q05722 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Col9a1Q05722 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Col9a1Q05722 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Col9a1Q05722 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Col9a1Q05722 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Col9a1Q05722 Gm9164-201ENSMUST00000118700 1014 ntBASIC11.78□□□□□ -0.52
Col9a1Q05722 Gm12791-201ENSMUST00000120788 655 ntBASIC11.78□□□□□ -0.52
Col9a1Q05722 Gm11278-201ENSMUST00000121002 997 ntBASIC11.78□□□□□ -0.52
Col9a1Q05722 Gm14829-201ENSMUST00000121499 1138 ntBASIC11.78□□□□□ -0.52
Col9a1Q05722 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.78□□□□□ -0.52
Col9a1Q05722 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Gm11817-201ENSMUST00000155578 685 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Gm16184-201ENSMUST00000162324 573 ntBASIC11.78□□□□□ -0.52
Col9a1Q05722 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Col9a1Q05722 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
Col9a1Q05722 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.78□□□□□ -0.52
Col9a1Q05722 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.78□□□□□ -0.52
Col9a1Q05722 Gm12407-201ENSMUST00000180219 324 ntBASIC11.78□□□□□ -0.52
Col9a1Q05722 Gm38145-201ENSMUST00000192319 693 ntBASIC11.78□□□□□ -0.52
Col9a1Q05722 Gm44137-201ENSMUST00000203670 367 ntBASIC11.78□□□□□ -0.52
Col9a1Q05722 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.78□□□□□ -0.52
Col9a1Q05722 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC11.78□□□□□ -0.52
Col9a1Q05722 AC157654.1-201ENSMUST00000224130 820 ntBASIC11.78□□□□□ -0.52
Col9a1Q05722 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 AC163295.2-202ENSMUST00000227763 1053 ntBASIC11.78□□□□□ -0.52
Col9a1Q05722 AC154213.1-201ENSMUST00000228234 583 ntBASIC11.78□□□□□ -0.52
Col9a1Q05722 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Col9a1Q05722 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.78□□□□□ -0.52
Col9a1Q05722 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Col9a1Q05722 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Gm8968-201ENSMUST00000199133 1303 ntBASIC11.78□□□□□ -0.52
Col9a1Q05722 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Col9a1Q05722 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Col9a1Q05722 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col9a1Q05722 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Col9a1Q05722 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Col9a1Q05722 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col9a1Q05722 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col9a1Q05722 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col9a1Q05722 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col9a1Q05722 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.77□□□□□ -0.52
Col9a1Q05722 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col9a1Q05722 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms