Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC9.94□□□□□ -0.82
Col8a1Q00780 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 Gm16167-201ENSMUST00000160428 1065 ntBASIC9.94□□□□□ -0.82
Col8a1Q00780 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC9.94□□□□□ -0.82
Col8a1Q00780 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC9.94□□□□□ -0.82
Col8a1Q00780 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Col8a1Q00780 Gm6855-201ENSMUST00000206307 790 ntBASIC9.94□□□□□ -0.82
Col8a1Q00780 Gm45481-201ENSMUST00000209717 877 ntBASIC9.94□□□□□ -0.82
Col8a1Q00780 Gm7082-201ENSMUST00000209880 969 ntBASIC9.94□□□□□ -0.82
Col8a1Q00780 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC9.94□□□□□ -0.82
Col8a1Q00780 AC114645.1-201ENSMUST00000215831 187 ntBASIC9.94□□□□□ -0.82
Col8a1Q00780 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Col8a1Q00780 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.94□□□□□ -0.82
Col8a1Q00780 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC9.94□□□□□ -0.82
Col8a1Q00780 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Col8a1Q00780 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.94□□□□□ -0.82
Col8a1Q00780 AC241621.2-201ENSMUST00000223991 2151 ntBASIC9.94□□□□□ -0.82
Col8a1Q00780 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Col8a1Q00780 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Col8a1Q00780 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Col8a1Q00780 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Gm43075-201ENSMUST00000198613 3905 ntBASIC9.93□□□□□ -0.82
Col8a1Q00780 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Col8a1Q00780 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC9.93□□□□□ -0.82
Col8a1Q00780 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.93□□□□□ -0.82
Col8a1Q00780 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Col8a1Q00780 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Col8a1Q00780 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.93□□□□□ -0.82
Col8a1Q00780 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Gm12179-201ENSMUST00000118344 1272 ntBASIC9.93□□□□□ -0.82
Col8a1Q00780 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC9.93□□□□□ -0.82
Col8a1Q00780 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Col8a1Q00780 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Col8a1Q00780 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Col8a1Q00780 Gm17214-201ENSMUST00000164501 541 ntBASIC9.93□□□□□ -0.82
Col8a1Q00780 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.93□□□□□ -0.82
Col8a1Q00780 Gm38117-201ENSMUST00000194653 939 ntBASIC9.93□□□□□ -0.82
Col8a1Q00780 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC9.93□□□□□ -0.82
Col8a1Q00780 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC9.93□□□□□ -0.82
Col8a1Q00780 Gm5451-201ENSMUST00000080545 579 ntBASIC9.93□□□□□ -0.82
Col8a1Q00780 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Col8a1Q00780 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC9.93□□□□□ -0.82
Col8a1Q00780 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Col8a1Q00780 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC9.93□□□□□ -0.82
Col8a1Q00780 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col8a1Q00780 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.92□□□□□ -0.82
Col8a1Q00780 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms