Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11□□□□□ -0.65
Nkx3-2P97503 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Gm15352-201ENSMUST00000118696 270 ntBASIC11□□□□□ -0.65
Nkx3-2P97503 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11□□□□□ -0.65
Nkx3-2P97503 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11□□□□□ -0.65
Nkx3-2P97503 Mir6546-201ENSMUST00000184460 62 ntBASIC11□□□□□ -0.65
Nkx3-2P97503 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nkx3-2P97503 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Gm5852-201ENSMUST00000194119 1021 ntBASIC11□□□□□ -0.65
Nkx3-2P97503 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11□□□□□ -0.65
Nkx3-2P97503 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Gm6108-201ENSMUST00000208365 367 ntBASIC11□□□□□ -0.65
Nkx3-2P97503 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Nkx3-2P97503 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 AC153961.1-201ENSMUST00000217760 385 ntBASIC11□□□□□ -0.65
Nkx3-2P97503 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11□□□□□ -0.65
Nkx3-2P97503 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nkx3-2P97503 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11□□□□□ -0.65
Nkx3-2P97503 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx3-2P97503 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11□□□□□ -0.65
Nkx3-2P97503 Gm44999-201ENSMUST00000207456 1493 ntBASIC11□□□□□ -0.65
Nkx3-2P97503 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.99□□□□□ -0.65
Nkx3-2P97503 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.99□□□□□ -0.65
Nkx3-2P97503 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.99□□□□□ -0.65
Nkx3-2P97503 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Gm13916-201ENSMUST00000117368 628 ntBASIC10.99□□□□□ -0.65
Nkx3-2P97503 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.99□□□□□ -0.65
Nkx3-2P97503 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Gm6450-201ENSMUST00000200896 574 ntBASIC10.99□□□□□ -0.65
Nkx3-2P97503 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.99□□□□□ -0.65
Nkx3-2P97503 Gm45398-201ENSMUST00000210561 165 ntBASIC10.99□□□□□ -0.65
Nkx3-2P97503 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.99□□□□□ -0.65
Nkx3-2P97503 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.99□□□□□ -0.65
Nkx3-2P97503 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx3-2P97503 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.98□□□□□ -0.65
Nkx3-2P97503 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms