Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
SgcbP82349 Gm37785-201ENSMUST00000195783 2408 ntBASIC10.4□□□□□ -0.74
SgcbP82349 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.4□□□□□ -0.74
SgcbP82349 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.4□□□□□ -0.74
SgcbP82349 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
SgcbP82349 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcbP82349 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SgcbP82349 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
SgcbP82349 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SgcbP82349 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SgcbP82349 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
SgcbP82349 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
SgcbP82349 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
SgcbP82349 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
SgcbP82349 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
SgcbP82349 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
SgcbP82349 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.39□□□□□ -0.75
SgcbP82349 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.39□□□□□ -0.75
SgcbP82349 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SgcbP82349 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.39□□□□□ -0.75
SgcbP82349 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.39□□□□□ -0.75
SgcbP82349 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Gm45072-201ENSMUST00000208673 929 ntBASIC10.39□□□□□ -0.75
SgcbP82349 Gm7940-201ENSMUST00000218195 769 ntBASIC10.39□□□□□ -0.75
SgcbP82349 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.39□□□□□ -0.75
SgcbP82349 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.39□□□□□ -0.75
SgcbP82349 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
SgcbP82349 Gm18829-201ENSMUST00000188150 1622 ntBASIC10.39□□□□□ -0.75
SgcbP82349 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.39□□□□□ -0.75
SgcbP82349 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
SgcbP82349 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
SgcbP82349 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC10.39□□□□□ -0.75
SgcbP82349 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcbP82349 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.38□□□□□ -0.75
SgcbP82349 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.38□□□□□ -0.75
SgcbP82349 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.38□□□□□ -0.75
SgcbP82349 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
SgcbP82349 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC10.38□□□□□ -0.75
SgcbP82349 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.38□□□□□ -0.75
SgcbP82349 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Gm14776-201ENSMUST00000121029 887 ntBASIC10.38□□□□□ -0.75
SgcbP82349 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.38□□□□□ -0.75
SgcbP82349 Gm15171-201ENSMUST00000122191 334 ntBASIC10.38□□□□□ -0.75
SgcbP82349 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SgcbP82349 Gm10051-201ENSMUST00000145209 414 ntBASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms