Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.79□□□□□ -0.36
Hmgb1P63158 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.79□□□□□ -0.36
Hmgb1P63158 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.79□□□□□ -0.36
Hmgb1P63158 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Hmgb1P63158 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.79□□□□□ -0.36
Hmgb1P63158 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.79□□□□□ -0.36
Hmgb1P63158 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.79□□□□□ -0.36
Hmgb1P63158 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hmgb1P63158 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Hmgb1P63158 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Hmgb1P63158 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.78□□□□□ -0.36
Hmgb1P63158 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Hmgb1P63158 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hmgb1P63158 Gm26361-201ENSMUST00000158868 186 ntBASIC12.78□□□□□ -0.36
Hmgb1P63158 Gm25700-201ENSMUST00000177693 110 ntBASIC12.78□□□□□ -0.36
Hmgb1P63158 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.78□□□□□ -0.36
Hmgb1P63158 Gm43822-201ENSMUST00000200285 476 ntBASIC12.78□□□□□ -0.36
Hmgb1P63158 Gm17812-201ENSMUST00000204935 318 ntBASIC12.78□□□□□ -0.36
Hmgb1P63158 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.78□□□□□ -0.36
Hmgb1P63158 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hmgb1P63158 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hmgb1P63158 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hmgb1P63158 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgb1P63158 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hmgb1P63158 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Hmgb1P63158 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.77□□□□□ -0.36
Hmgb1P63158 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.77□□□□□ -0.36
Hmgb1P63158 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgb1P63158 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgb1P63158 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgb1P63158 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgb1P63158 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgb1P63158 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgb1P63158 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.77□□□□□ -0.36
Hmgb1P63158 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Hmgb1P63158 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgb1P63158 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.77□□□□□ -0.37
Hmgb1P63158 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Hmgb1P63158 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm22323-201ENSMUST00000103832 109 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Hmgb1P63158 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm4310-201ENSMUST00000177847 889 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgb1P63158 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm29615-201ENSMUST00000185371 697 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm28224-201ENSMUST00000186078 697 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm29001-201ENSMUST00000186177 697 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm28292-201ENSMUST00000186593 697 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm28101-201ENSMUST00000187608 697 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm29076-201ENSMUST00000187689 697 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm28302-201ENSMUST00000187931 697 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm28646-201ENSMUST00000188220 697 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm28205-201ENSMUST00000189177 697 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm29032-201ENSMUST00000189797 697 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm28695-201ENSMUST00000190300 697 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm37448-201ENSMUST00000192795 697 ntBASIC12.77□□□□□ -0.37
Hmgb1P63158 Gm43630-201ENSMUST00000201550 776 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms