Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Lmo4P61969 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lmo4P61969 Gm7114-201ENSMUST00000190159 1789 ntBASIC9.35□□□□□ -0.91
Lmo4P61969 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Lmo4P61969 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.34□□□□□ -0.91
Lmo4P61969 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC9.34□□□□□ -0.91
Lmo4P61969 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Lmo4P61969 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Lmo4P61969 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.34□□□□□ -0.91
Lmo4P61969 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Lmo4P61969 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Gm25880-201ENSMUST00000104331 132 ntBASIC9.34□□□□□ -0.91
Lmo4P61969 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.34□□□□□ -0.91
Lmo4P61969 Gm12194-201ENSMUST00000117756 1012 ntBASIC9.34□□□□□ -0.91
Lmo4P61969 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC9.34□□□□□ -0.91
Lmo4P61969 Gm12990-201ENSMUST00000120372 468 ntBASIC9.34□□□□□ -0.91
Lmo4P61969 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC9.34□□□□□ -0.91
Lmo4P61969 Gm22877-201ENSMUST00000175451 105 ntBASIC9.34□□□□□ -0.91
Lmo4P61969 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Gm4895-201ENSMUST00000181646 1137 ntBASIC9.34□□□□□ -0.91
Lmo4P61969 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC9.34□□□□□ -0.91
Lmo4P61969 Gm9884-201ENSMUST00000194343 1222 ntBASIC9.34□□□□□ -0.91
Lmo4P61969 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC9.34□□□□□ -0.91
Lmo4P61969 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Lmo4P61969 CT030653.1-201ENSMUST00000224382 1279 ntBASIC9.34□□□□□ -0.91
Lmo4P61969 CT025602.2-201ENSMUST00000226553 772 ntBASIC9.34□□□□□ -0.91
Lmo4P61969 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Lmo4P61969 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Lmo4P61969 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Lmo4P61969 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lmo4P61969 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Lmo4P61969 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
Lmo4P61969 Gm18294-201ENSMUST00000176980 1748 ntBASIC9.34□□□□□ -0.92
Lmo4P61969 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Lmo4P61969 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lmo4P61969 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lmo4P61969 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lmo4P61969 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lmo4P61969 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.33□□□□□ -0.92
Lmo4P61969 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lmo4P61969 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC9.33□□□□□ -0.92
Lmo4P61969 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Lmo4P61969 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lmo4P61969 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC9.33□□□□□ -0.92
Lmo4P61969 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lmo4P61969 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Lmo4P61969 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lmo4P61969 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
Lmo4P61969 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Lmo4P61969 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Lmo4P61969 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lmo4P61969 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lmo4P61969 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lmo4P61969 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Lmo4P61969 Gm14740-201ENSMUST00000118538 1150 ntBASIC9.33□□□□□ -0.92
Lmo4P61969 Gm11340-201ENSMUST00000119226 412 ntBASIC9.33□□□□□ -0.92
Lmo4P61969 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lmo4P61969 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lmo4P61969 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lmo4P61969 Gm24992-201ENSMUST00000157412 130 ntBASIC9.33□□□□□ -0.92
Lmo4P61969 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC9.33□□□□□ -0.92
Lmo4P61969 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.33□□□□□ -0.92
Lmo4P61969 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lmo4P61969 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Lmo4P61969 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Lmo4P61969 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC9.33□□□□□ -0.92
Lmo4P61969 Gm37638-201ENSMUST00000194337 1123 ntBASIC9.33□□□□□ -0.92
Lmo4P61969 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lmo4P61969 Mt1-202ENSMUST00000211807 1085 ntBASIC9.33□□□□□ -0.92
Lmo4P61969 AC164618.2-201ENSMUST00000224770 573 ntBASIC9.33□□□□□ -0.92
Lmo4P61969 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lmo4P61969 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lmo4P61969 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Lmo4P61969 Gm16380-201ENSMUST00000077997 478 ntBASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms