Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.35□□□□□ -0.43
NrlP54846 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
NrlP54846 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.35□□□□□ -0.43
NrlP54846 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.35□□□□□ -0.43
NrlP54846 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
NrlP54846 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.34□□□□□ -0.43
NrlP54846 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
NrlP54846 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.34□□□□□ -0.43
NrlP54846 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
NrlP54846 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
NrlP54846 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
NrlP54846 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
NrlP54846 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.34□□□□□ -0.43
NrlP54846 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
NrlP54846 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
NrlP54846 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.34□□□□□ -0.43
NrlP54846 Mir6407-201ENSMUST00000184510 101 ntBASIC12.34□□□□□ -0.43
NrlP54846 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
NrlP54846 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
NrlP54846 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
NrlP54846 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
NrlP54846 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
NrlP54846 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
NrlP54846 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.34□□□□□ -0.43
NrlP54846 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
NrlP54846 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
NrlP54846 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
NrlP54846 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NrlP54846 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
NrlP54846 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
NrlP54846 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.33□□□□□ -0.44
NrlP54846 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.33□□□□□ -0.44
NrlP54846 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.33□□□□□ -0.44
NrlP54846 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.33□□□□□ -0.44
NrlP54846 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
NrlP54846 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
NrlP54846 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
NrlP54846 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.33□□□□□ -0.44
NrlP54846 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.33□□□□□ -0.44
NrlP54846 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.33□□□□□ -0.44
NrlP54846 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.33□□□□□ -0.44
NrlP54846 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.33□□□□□ -0.44
NrlP54846 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
NrlP54846 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
NrlP54846 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
NrlP54846 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.33□□□□□ -0.44
NrlP54846 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
NrlP54846 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
NrlP54846 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NrlP54846 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NrlP54846 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
NrlP54846 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NrlP54846 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms