Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 AC158388.3-202ENSMUST00000225517 775 ntBASIC11.56□□□□□ -0.56
Atxn1P54254 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.56□□□□□ -0.56
Atxn1P54254 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.56□□□□□ -0.56
Atxn1P54254 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atxn1P54254 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atxn1P54254 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.56□□□□□ -0.56
Atxn1P54254 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.56□□□□□ -0.56
Atxn1P54254 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Atxn1P54254 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Atxn1P54254 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Atxn1P54254 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atxn1P54254 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atxn1P54254 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atxn1P54254 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atxn1P54254 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atxn1P54254 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Atxn1P54254 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Atxn1P54254 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atxn1P54254 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.55□□□□□ -0.56
Atxn1P54254 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Atxn1P54254 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.55□□□□□ -0.56
Atxn1P54254 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Atxn1P54254 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.55□□□□□ -0.56
Atxn1P54254 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.55□□□□□ -0.56
Atxn1P54254 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.55□□□□□ -0.56
Atxn1P54254 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.55□□□□□ -0.56
Atxn1P54254 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.55□□□□□ -0.56
Atxn1P54254 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.55□□□□□ -0.56
Atxn1P54254 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.55□□□□□ -0.56
Atxn1P54254 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.55□□□□□ -0.56
Atxn1P54254 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.55□□□□□ -0.56
Atxn1P54254 Gm26368-201ENSMUST00000157826 118 ntBASIC11.55□□□□□ -0.56
Atxn1P54254 Gm24844-201ENSMUST00000158679 127 ntBASIC11.55□□□□□ -0.56
Atxn1P54254 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.55□□□□□ -0.56
Atxn1P54254 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.55□□□□□ -0.56
Atxn1P54254 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Gm6390-201ENSMUST00000215034 589 ntBASIC11.55□□□□□ -0.56
Atxn1P54254 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Gm16380-201ENSMUST00000077997 478 ntBASIC11.55□□□□□ -0.56
Atxn1P54254 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.55□□□□□ -0.56
Atxn1P54254 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.55□□□□□ -0.56
Atxn1P54254 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.55□□□□□ -0.56
Atxn1P54254 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Atxn1P54254 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atxn1P54254 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Atxn1P54254 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.54□□□□□ -0.56
Atxn1P54254 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Atxn1P54254 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.54□□□□□ -0.56
Atxn1P54254 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Atxn1P54254 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.54□□□□□ -0.56
Atxn1P54254 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Atxn1P54254 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.54□□□□□ -0.56
Atxn1P54254 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.54□□□□□ -0.56
Atxn1P54254 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Atxn1P54254 Gm24231-201ENSMUST00000104315 133 ntBASIC11.54□□□□□ -0.56
Atxn1P54254 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms