Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.44□□□□□ -0.58
Pdx1P52946 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pdx1P52946 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Pdx1P52946 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.44□□□□□ -0.58
Pdx1P52946 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.44□□□□□ -0.58
Pdx1P52946 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.44□□□□□ -0.58
Pdx1P52946 Gm12566-201ENSMUST00000121479 359 ntBASIC11.44□□□□□ -0.58
Pdx1P52946 Gm26047-201ENSMUST00000157308 113 ntBASIC11.44□□□□□ -0.58
Pdx1P52946 Gm16570-201ENSMUST00000161951 436 ntBASIC11.44□□□□□ -0.58
Pdx1P52946 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.44□□□□□ -0.58
Pdx1P52946 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.44□□□□□ -0.58
Pdx1P52946 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.44□□□□□ -0.58
Pdx1P52946 Gm26047-202ENSMUST00000198840 115 ntBASIC11.44□□□□□ -0.58
Pdx1P52946 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.44□□□□□ -0.58
Pdx1P52946 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Gm10254-201ENSMUST00000052888 867 ntBASIC11.44□□□□□ -0.58
Pdx1P52946 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Pdx1P52946 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pdx1P52946 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Pdx1P52946 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Pdx1P52946 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pdx1P52946 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.44□□□□□ -0.58
Pdx1P52946 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdx1P52946 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Pdx1P52946 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Pdx1P52946 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Pdx1P52946 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Pdx1P52946 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.43□□□□□ -0.58
Pdx1P52946 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.43□□□□□ -0.58
Pdx1P52946 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.43□□□□□ -0.58
Pdx1P52946 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Spcs1-203ENSMUST00000226374 592 ntBASIC11.43□□□□□ -0.58
Pdx1P52946 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Pdx1P52946 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Pdx1P52946 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdx1P52946 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.42□□□□□ -0.58
Pdx1P52946 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Pdx1P52946 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.42□□□□□ -0.58
Pdx1P52946 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pdx1P52946 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.42□□□□□ -0.58
Pdx1P52946 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Pdx1P52946 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Pdx1P52946 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.42□□□□□ -0.58
Pdx1P52946 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdx1P52946 Gm24844-201ENSMUST00000158679 127 ntBASIC11.42□□□□□ -0.58
Pdx1P52946 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
Pdx1P52946 Gm18367-201ENSMUST00000176139 600 ntBASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms