Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hmga2P52927 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.84□□□□□ -0.83
Hmga2P52927 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hmga2P52927 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hmga2P52927 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hmga2P52927 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hmga2P52927 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hmga2P52927 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.84□□□□□ -0.83
Hmga2P52927 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hmga2P52927 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hmga2P52927 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hmga2P52927 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hmga2P52927 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Hmga2P52927 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hmga2P52927 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Gm6831-202ENSMUST00000213025 1673 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Hmga2P52927 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC9.83□□□□□ -0.84
Hmga2P52927 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Gm26286-201ENSMUST00000104166 134 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Hmga2P52927 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Hmga2P52927 Gm15824-201ENSMUST00000119516 955 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Hmga2P52927 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Hmga2P52927 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.83□□□□□ -0.84
Hmga2P52927 Gm28937-201ENSMUST00000185413 695 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 Gm29400-201ENSMUST00000187208 695 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 Gm28662-201ENSMUST00000188446 695 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC9.83□□□□□ -0.84
Hmga2P52927 Gm28251-201ENSMUST00000188835 695 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Gm37318-201ENSMUST00000194325 695 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 Gm38017-201ENSMUST00000194768 695 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 Gm37287-201ENSMUST00000195449 695 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 Gm37793-201ENSMUST00000195548 695 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 Gm37008-201ENSMUST00000195712 319 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Gm2553-201ENSMUST00000215986 605 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 Gm8712-201ENSMUST00000221090 701 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 Gm5455-201ENSMUST00000058710 715 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Hmga2P52927 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.83□□□□□ -0.84
Hmga2P52927 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Hmga2P52927 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Hmga2P52927 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.83□□□□□ -0.84
Hmga2P52927 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Hmga2P52927 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Hmga2P52927 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.83□□□□□ -0.84
Hmga2P52927 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hmga2P52927 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Hmga2P52927 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hmga2P52927 AC114008.2-201ENSMUST00000227699 1347 ntBASIC9.82□□□□□ -0.84
Hmga2P52927 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Hmga2P52927 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hmga2P52927 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Hmga2P52927 Dctn4-202ENSMUST00000223590 1530 ntBASIC9.82□□□□□ -0.84
Hmga2P52927 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Hmga2P52927 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hmga2P52927 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hmga2P52927 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hmga2P52927 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hmga2P52927 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hmga2P52927 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hmga2P52927 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC9.82□□□□□ -0.84
Hmga2P52927 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hmga2P52927 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hmga2P52927 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hmga2P52927 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hmga2P52927 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hmga2P52927 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hmga2P52927 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hmga2P52927 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC9.82□□□□□ -0.84
Hmga2P52927 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms