Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt6aP50446 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt6aP50446 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.48□□□□□ -0.57
Krt6aP50446 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt6aP50446 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt6aP50446 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt6aP50446 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt6aP50446 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Krt6aP50446 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.47□□□□□ -0.57
Krt6aP50446 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Krt6aP50446 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Krt6aP50446 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Krt6aP50446 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.47□□□□□ -0.57
Krt6aP50446 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Krt6aP50446 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Krt6aP50446 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Gm11500-201ENSMUST00000118237 601 ntBASIC11.47□□□□□ -0.57
Krt6aP50446 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.47□□□□□ -0.57
Krt6aP50446 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.47□□□□□ -0.57
Krt6aP50446 AY702102-202ENSMUST00000194651 1173 ntBASIC11.47□□□□□ -0.57
Krt6aP50446 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.47□□□□□ -0.57
Krt6aP50446 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Krt6aP50446 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Krt6aP50446 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Krt6aP50446 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.47□□□□□ -0.57
Krt6aP50446 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.47□□□□□ -0.57
Krt6aP50446 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Krt6aP50446 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Krt6aP50446 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Krt6aP50446 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Krt6aP50446 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt6aP50446 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt6aP50446 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Krt6aP50446 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt6aP50446 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Krt6aP50446 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt6aP50446 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Krt6aP50446 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.46□□□□□ -0.57
Krt6aP50446 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Krt6aP50446 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt6aP50446 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.46□□□□□ -0.57
Krt6aP50446 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt6aP50446 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.46□□□□□ -0.57
Krt6aP50446 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Krt6aP50446 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.46□□□□□ -0.57
Krt6aP50446 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.46□□□□□ -0.57
Krt6aP50446 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Krt6aP50446 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.46□□□□□ -0.57
Krt6aP50446 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.46□□□□□ -0.57
Krt6aP50446 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.46□□□□□ -0.57
Krt6aP50446 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Krt6aP50446 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Krt6aP50446 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Krt6aP50446 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt6aP50446 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt6aP50446 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt6aP50446 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Krt6aP50446 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Krt6aP50446 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Krt6aP50446 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Krt6aP50446 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Krt6aP50446 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Krt6aP50446 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Krt6aP50446 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Krt6aP50446 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Krt6aP50446 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Krt6aP50446 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Krt6aP50446 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.45□□□□□ -0.58
Krt6aP50446 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Krt6aP50446 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Krt6aP50446 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Krt6aP50446 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms