Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
GdnfP48540 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
GdnfP48540 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
GdnfP48540 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
GdnfP48540 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
GdnfP48540 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
GdnfP48540 Gm44863-201ENSMUST00000207613 1422 ntBASIC10.23□□□□□ -0.77
GdnfP48540 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
GdnfP48540 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.23□□□□□ -0.77
GdnfP48540 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
GdnfP48540 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.23□□□□□ -0.77
GdnfP48540 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
GdnfP48540 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.22□□□□□ -0.77
GdnfP48540 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
GdnfP48540 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
GdnfP48540 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.22□□□□□ -0.77
GdnfP48540 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.22□□□□□ -0.77
GdnfP48540 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.22□□□□□ -0.77
GdnfP48540 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.22□□□□□ -0.77
GdnfP48540 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.22□□□□□ -0.77
GdnfP48540 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.22□□□□□ -0.77
GdnfP48540 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.22□□□□□ -0.77
GdnfP48540 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Gm44958-201ENSMUST00000203734 736 ntBASIC10.22□□□□□ -0.77
GdnfP48540 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.22□□□□□ -0.77
GdnfP48540 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
GdnfP48540 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.22□□□□□ -0.77
GdnfP48540 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.22□□□□□ -0.77
GdnfP48540 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
GdnfP48540 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.22□□□□□ -0.77
GdnfP48540 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.22□□□□□ -0.77
GdnfP48540 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.22□□□□□ -0.77
GdnfP48540 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
GdnfP48540 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.22□□□□□ -0.77
GdnfP48540 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
GdnfP48540 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
GdnfP48540 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
GdnfP48540 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
GdnfP48540 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
GdnfP48540 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
GdnfP48540 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
GdnfP48540 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
GdnfP48540 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
GdnfP48540 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
GdnfP48540 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
GdnfP48540 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
GdnfP48540 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.21□□□□□ -0.77
GdnfP48540 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
GdnfP48540 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
GdnfP48540 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
GdnfP48540 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
GdnfP48540 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
GdnfP48540 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.77
GdnfP48540 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
GdnfP48540 Gm23270-201ENSMUST00000104055 131 ntBASIC10.21□□□□□ -0.77
GdnfP48540 Gm14723-201ENSMUST00000118686 215 ntBASIC10.21□□□□□ -0.77
GdnfP48540 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
GdnfP48540 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
GdnfP48540 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.21□□□□□ -0.77
GdnfP48540 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
GdnfP48540 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC10.21□□□□□ -0.77
GdnfP48540 Gm26956-201ENSMUST00000182176 986 ntBASIC10.21□□□□□ -0.77
GdnfP48540 Gm43438-201ENSMUST00000198133 379 ntBASIC10.21□□□□□ -0.77
GdnfP48540 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
GdnfP48540 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
GdnfP48540 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
GdnfP48540 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.21□□□□□ -0.77
GdnfP48540 Gm8712-201ENSMUST00000221090 701 ntBASIC10.21□□□□□ -0.77
GdnfP48540 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.21□□□□□ -0.77
GdnfP48540 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.21□□□□□ -0.77
GdnfP48540 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
GdnfP48540 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.21□□□□□ -0.77
GdnfP48540 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
GdnfP48540 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
GdnfP48540 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms