Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps4bP46467 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Vps4bP46467 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps4bP46467 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps4bP46467 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps4bP46467 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.76□□□□□ -0.53
Vps4bP46467 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Vps4bP46467 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Vps4bP46467 Gm11500-201ENSMUST00000118237 601 ntBASIC11.76□□□□□ -0.53
Vps4bP46467 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.76□□□□□ -0.53
Vps4bP46467 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.76□□□□□ -0.53
Vps4bP46467 Gm24514-201ENSMUST00000174961 285 ntBASIC11.76□□□□□ -0.53
Vps4bP46467 Mir5120-201ENSMUST00000175020 78 ntBASIC11.76□□□□□ -0.53
Vps4bP46467 Gm27627-201ENSMUST00000183644 150 ntBASIC11.76□□□□□ -0.53
Vps4bP46467 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.76□□□□□ -0.53
Vps4bP46467 Gm38317-201ENSMUST00000195564 343 ntBASIC11.76□□□□□ -0.53
Vps4bP46467 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.76□□□□□ -0.53
Vps4bP46467 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.76□□□□□ -0.53
Vps4bP46467 Gm43966-201ENSMUST00000203301 612 ntBASIC11.76□□□□□ -0.53
Vps4bP46467 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.76□□□□□ -0.53
Vps4bP46467 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.76□□□□□ -0.53
Vps4bP46467 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.76□□□□□ -0.53
Vps4bP46467 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Vps4bP46467 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Vps4bP46467 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.76□□□□□ -0.53
Vps4bP46467 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps4bP46467 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.76□□□□□ -0.53
Vps4bP46467 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Vps4bP46467 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.75□□□□□ -0.53
Vps4bP46467 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Vps4bP46467 Gm12566-201ENSMUST00000121479 359 ntBASIC11.75□□□□□ -0.53
Vps4bP46467 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.75□□□□□ -0.53
Vps4bP46467 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.75□□□□□ -0.53
Vps4bP46467 Mir8093-201ENSMUST00000185043 137 ntBASIC11.75□□□□□ -0.53
Vps4bP46467 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.75□□□□□ -0.53
Vps4bP46467 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.75□□□□□ -0.53
Vps4bP46467 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.75□□□□□ -0.53
Vps4bP46467 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.75□□□□□ -0.53
Vps4bP46467 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Gm10254-201ENSMUST00000052888 867 ntBASIC11.75□□□□□ -0.53
Vps4bP46467 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.75□□□□□ -0.53
Vps4bP46467 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.75□□□□□ -0.53
Vps4bP46467 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Vps4bP46467 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.75□□□□□ -0.53
Vps4bP46467 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.75□□□□□ -0.53
Vps4bP46467 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.75□□□□□ -0.53
Vps4bP46467 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.75□□□□□ -0.53
Vps4bP46467 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps4bP46467 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Vps4bP46467 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Vps4bP46467 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps4bP46467 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms