Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Gm38117-201ENSMUST00000194653 939 ntBASIC11.16□□□□□ -0.62
Tnfsf4P43488 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Gm45865-201ENSMUST00000211815 945 ntBASIC11.16□□□□□ -0.62
Tnfsf4P43488 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.16□□□□□ -0.62
Tnfsf4P43488 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.16□□□□□ -0.62
Tnfsf4P43488 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.16□□□□□ -0.62
Tnfsf4P43488 Cts7-204ENSMUST00000225321 1257 ntBASIC11.16□□□□□ -0.62
Tnfsf4P43488 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.16□□□□□ -0.62
Tnfsf4P43488 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Gm13296-201ENSMUST00000117854 997 ntBASIC11.15□□□□□ -0.62
Tnfsf4P43488 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.15□□□□□ -0.62
Tnfsf4P43488 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Gm4310-201ENSMUST00000177847 889 ntBASIC11.15□□□□□ -0.62
Tnfsf4P43488 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.15□□□□□ -0.62
Tnfsf4P43488 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Gm4157-201ENSMUST00000211647 679 ntBASIC11.15□□□□□ -0.62
Tnfsf4P43488 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.15□□□□□ -0.62
Tnfsf4P43488 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfsf4P43488 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Tnfsf4P43488 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfsf4P43488 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfsf4P43488 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfsf4P43488 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.15□□□□□ -0.63
Tnfsf4P43488 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfsf4P43488 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Tnfsf4P43488 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Tnfsf4P43488 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.14□□□□□ -0.63
Tnfsf4P43488 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Tnfsf4P43488 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Gm8343-201ENSMUST00000182705 994 ntBASIC11.14□□□□□ -0.63
Tnfsf4P43488 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms