Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.9□□□□□ -0.66
Sox6P40645 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.9□□□□□ -0.66
Sox6P40645 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Sox6P40645 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Sox6P40645 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Gm13665-201ENSMUST00000120830 528 ntBASIC10.9□□□□□ -0.66
Sox6P40645 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.9□□□□□ -0.66
Sox6P40645 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.9□□□□□ -0.66
Sox6P40645 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.9□□□□□ -0.66
Sox6P40645 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.66
Sox6P40645 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.9□□□□□ -0.66
Sox6P40645 Gm25890-201ENSMUST00000177643 165 ntBASIC10.9□□□□□ -0.66
Sox6P40645 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.9□□□□□ -0.66
Sox6P40645 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.9□□□□□ -0.66
Sox6P40645 Gm22614-201ENSMUST00000178300 165 ntBASIC10.9□□□□□ -0.66
Sox6P40645 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.9□□□□□ -0.66
Sox6P40645 Rprl1-202ENSMUST00000198476 238 ntBASIC10.9□□□□□ -0.66
Sox6P40645 Gm45598-202ENSMUST00000210719 986 ntBASIC10.9□□□□□ -0.66
Sox6P40645 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.9□□□□□ -0.66
Sox6P40645 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Sox6P40645 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Gm22042-201ENSMUST00000082989 165 ntBASIC10.9□□□□□ -0.66
Sox6P40645 Gm26110-201ENSMUST00000083971 165 ntBASIC10.9□□□□□ -0.66
Sox6P40645 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Sox6P40645 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Sox6P40645 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Sox6P40645 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.9□□□□□ -0.66
Sox6P40645 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.9□□□□□ -0.66
Sox6P40645 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.9□□□□□ -0.66
Sox6P40645 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.9□□□□□ -0.66
Sox6P40645 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.67
Sox6P40645 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sox6P40645 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sox6P40645 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Sox6P40645 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sox6P40645 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.67
Sox6P40645 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Sox6P40645 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Sox6P40645 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Sox6P40645 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.89□□□□□ -0.67
Sox6P40645 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Sox6P40645 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Sox6P40645 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Gm11989-201ENSMUST00000117240 672 ntBASIC10.89□□□□□ -0.67
Sox6P40645 Gm11362-201ENSMUST00000118838 850 ntBASIC10.89□□□□□ -0.67
Sox6P40645 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sox6P40645 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.89□□□□□ -0.67
Sox6P40645 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.89□□□□□ -0.67
Sox6P40645 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Rprl1-201ENSMUST00000158050 327 ntBASIC10.89□□□□□ -0.67
Sox6P40645 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.89□□□□□ -0.67
Sox6P40645 Gm32999-201ENSMUST00000192693 562 ntBASIC10.89□□□□□ -0.67
Sox6P40645 AA914427-201ENSMUST00000193194 1166 ntBASIC10.89□□□□□ -0.67
Sox6P40645 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.89□□□□□ -0.67
Sox6P40645 Gm44967-201ENSMUST00000207047 631 ntBASIC10.89□□□□□ -0.67
Sox6P40645 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.89□□□□□ -0.67
Sox6P40645 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.89□□□□□ -0.67
Sox6P40645 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.89□□□□□ -0.67
Sox6P40645 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.89□□□□□ -0.67
Sox6P40645 Gm19994-201ENSMUST00000217086 586 ntBASIC10.89□□□□□ -0.67
Sox6P40645 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sox6P40645 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Sox6P40645 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sox6P40645 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.89□□□□□ -0.67
Sox6P40645 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms