Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm4157-201ENSMUST00000211647 679 ntBASIC11.21□□□□□ -0.61
TfamP40630 Gm17827-201ENSMUST00000211825 742 ntBASIC11.21□□□□□ -0.61
TfamP40630 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TfamP40630 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TfamP40630 Gm10254-201ENSMUST00000052888 867 ntBASIC11.21□□□□□ -0.61
TfamP40630 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
TfamP40630 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TfamP40630 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TfamP40630 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TfamP40630 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TfamP40630 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TfamP40630 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TfamP40630 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TfamP40630 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
TfamP40630 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.21□□□□□ -0.62
TfamP40630 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TfamP40630 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
TfamP40630 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.62
TfamP40630 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TfamP40630 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
TfamP40630 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TfamP40630 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.2□□□□□ -0.62
TfamP40630 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TfamP40630 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
TfamP40630 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
TfamP40630 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TfamP40630 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.2□□□□□ -0.62
TfamP40630 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.2□□□□□ -0.62
TfamP40630 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.2□□□□□ -0.62
TfamP40630 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
TfamP40630 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Gm13665-201ENSMUST00000120830 528 ntBASIC11.2□□□□□ -0.62
TfamP40630 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.2□□□□□ -0.62
TfamP40630 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.2□□□□□ -0.62
TfamP40630 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.62
TfamP40630 Gm8343-201ENSMUST00000182705 994 ntBASIC11.2□□□□□ -0.62
TfamP40630 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.2□□□□□ -0.62
TfamP40630 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.2□□□□□ -0.62
TfamP40630 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.2□□□□□ -0.62
TfamP40630 Gm17812-201ENSMUST00000204935 318 ntBASIC11.2□□□□□ -0.62
TfamP40630 Gm9797-202ENSMUST00000218003 294 ntBASIC11.2□□□□□ -0.62
TfamP40630 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
TfamP40630 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.2□□□□□ -0.62
TfamP40630 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TfamP40630 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TfamP40630 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TfamP40630 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TfamP40630 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TfamP40630 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TfamP40630 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TfamP40630 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TfamP40630 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.19□□□□□ -0.62
TfamP40630 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.19□□□□□ -0.62
TfamP40630 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.19□□□□□ -0.62
TfamP40630 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
TfamP40630 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TfamP40630 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
TfamP40630 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.19□□□□□ -0.62
TfamP40630 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.19□□□□□ -0.62
TfamP40630 Gm22323-201ENSMUST00000103832 109 ntBASIC11.19□□□□□ -0.62
TfamP40630 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.19□□□□□ -0.62
TfamP40630 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TfamP40630 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.19□□□□□ -0.62
TfamP40630 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.19□□□□□ -0.62
TfamP40630 Gm26361-201ENSMUST00000158868 186 ntBASIC11.19□□□□□ -0.62
TfamP40630 Gm5616-201ENSMUST00000165252 384 ntBASIC11.19□□□□□ -0.62
TfamP40630 Gm8741-201ENSMUST00000174736 384 ntBASIC11.19□□□□□ -0.62
TfamP40630 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.19□□□□□ -0.62
TfamP40630 Gm4310-201ENSMUST00000177847 889 ntBASIC11.19□□□□□ -0.62
TfamP40630 Gm27627-201ENSMUST00000183644 150 ntBASIC11.19□□□□□ -0.62
TfamP40630 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.19□□□□□ -0.62
TfamP40630 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms