Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.71□□□□□ -0.69
Sftpa1P35242 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Gm26368-201ENSMUST00000157826 118 ntBASIC10.71□□□□□ -0.69
Sftpa1P35242 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Sftpa1P35242 Gm25677-201ENSMUST00000174983 72 ntBASIC10.71□□□□□ -0.69
Sftpa1P35242 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Mir8093-201ENSMUST00000185043 137 ntBASIC10.71□□□□□ -0.69
Sftpa1P35242 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Gm37365-201ENSMUST00000193109 409 ntBASIC10.71□□□□□ -0.69
Sftpa1P35242 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.71□□□□□ -0.69
Sftpa1P35242 Gm44216-201ENSMUST00000203942 157 ntBASIC10.71□□□□□ -0.69
Sftpa1P35242 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Sftpa1P35242 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC10.71□□□□□ -0.69
Sftpa1P35242 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sftpa1P35242 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.71□□□□□ -0.69
Sftpa1P35242 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.7
Sftpa1P35242 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sftpa1P35242 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sftpa1P35242 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Sftpa1P35242 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sftpa1P35242 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.71□□□□□ -0.7
Sftpa1P35242 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sftpa1P35242 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.7□□□□□ -0.7
Sftpa1P35242 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.7□□□□□ -0.7
Sftpa1P35242 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Sftpa1P35242 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sftpa1P35242 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Sftpa1P35242 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sftpa1P35242 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Sftpa1P35242 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.7□□□□□ -0.7
Sftpa1P35242 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.7□□□□□ -0.7
Sftpa1P35242 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.7□□□□□ -0.7
Sftpa1P35242 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.7□□□□□ -0.7
Sftpa1P35242 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Sftpa1P35242 Gm14497-201ENSMUST00000119537 580 ntBASIC10.7□□□□□ -0.7
Sftpa1P35242 Gm5555-201ENSMUST00000120352 1111 ntBASIC10.7□□□□□ -0.7
Sftpa1P35242 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.7□□□□□ -0.7
Sftpa1P35242 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC10.7□□□□□ -0.7
Sftpa1P35242 Gm24809-201ENSMUST00000175318 271 ntBASIC10.7□□□□□ -0.7
Sftpa1P35242 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.7□□□□□ -0.7
Sftpa1P35242 Gm42430-201ENSMUST00000197209 616 ntBASIC10.7□□□□□ -0.7
Sftpa1P35242 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.7□□□□□ -0.7
Sftpa1P35242 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC10.7□□□□□ -0.7
Sftpa1P35242 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sftpa1P35242 Gm14005-208ENSMUST00000223654 681 ntBASIC10.7□□□□□ -0.7
Sftpa1P35242 AC158392.3-201ENSMUST00000224271 1284 ntBASIC10.7□□□□□ -0.7
Sftpa1P35242 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.7□□□□□ -0.7
Sftpa1P35242 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Sftpa1P35242 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Sftpa1P35242 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Sftpa1P35242 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sftpa1P35242 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.7□□□□□ -0.7
Sftpa1P35242 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.7□□□□□ -0.7
Sftpa1P35242 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sftpa1P35242 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sftpa1P35242 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sftpa1P35242 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms