Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Nedd8P29595 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Nedd8P29595 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10.63□□□□□ -0.71
Nedd8P29595 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Nedd8P29595 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.63□□□□□ -0.71
Nedd8P29595 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.63□□□□□ -0.71
Nedd8P29595 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.63□□□□□ -0.71
Nedd8P29595 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.63□□□□□ -0.71
Nedd8P29595 Gm28631-201ENSMUST00000190740 334 ntBASIC10.63□□□□□ -0.71
Nedd8P29595 Gm2756-201ENSMUST00000195851 400 ntBASIC10.63□□□□□ -0.71
Nedd8P29595 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.63□□□□□ -0.71
Nedd8P29595 Gm8463-201ENSMUST00000208573 613 ntBASIC10.63□□□□□ -0.71
Nedd8P29595 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Gm5904-201ENSMUST00000210286 865 ntBASIC10.63□□□□□ -0.71
Nedd8P29595 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.63□□□□□ -0.71
Nedd8P29595 Gm6218-201ENSMUST00000219812 628 ntBASIC10.63□□□□□ -0.71
Nedd8P29595 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Nedd8P29595 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.63□□□□□ -0.71
Nedd8P29595 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Nedd8P29595 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Nedd8P29595 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Nedd8P29595 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nedd8P29595 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Nedd8P29595 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 AA474408-201ENSMUST00000098110 3339 ntBASIC10.62□□□□□ -0.71
Nedd8P29595 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Nedd8P29595 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Gm13342-201ENSMUST00000121055 207 ntBASIC10.62□□□□□ -0.71
Nedd8P29595 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.62□□□□□ -0.71
Nedd8P29595 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Nedd8P29595 Gm26308-201ENSMUST00000157768 69 ntBASIC10.62□□□□□ -0.71
Nedd8P29595 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.62□□□□□ -0.71
Nedd8P29595 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Nedd8P29595 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Nedd8P29595 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.62□□□□□ -0.71
Nedd8P29595 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.62□□□□□ -0.71
Nedd8P29595 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.62□□□□□ -0.71
Nedd8P29595 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.62□□□□□ -0.71
Nedd8P29595 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC10.62□□□□□ -0.71
Nedd8P29595 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.62□□□□□ -0.71
Nedd8P29595 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.62□□□□□ -0.71
Nedd8P29595 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nedd8P29595 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Nedd8P29595 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nedd8P29595 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.61□□□□□ -0.71
Nedd8P29595 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms