Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm9369-201ENSMUST00000196009 733 ntBASIC13.27□□□□□ -0.29
Vcam1P29533 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vcam1P29533 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcam1P29533 AC154305.2-201ENSMUST00000225813 901 ntBASIC13.27□□□□□ -0.29
Vcam1P29533 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcam1P29533 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Vcam1P29533 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.27□□□□□ -0.29
Vcam1P29533 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcam1P29533 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vcam1P29533 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Vcam1P29533 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Vcam1P29533 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcam1P29533 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Vcam1P29533 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcam1P29533 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcam1P29533 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcam1P29533 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcam1P29533 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vcam1P29533 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vcam1P29533 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vcam1P29533 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Vcam1P29533 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.26□□□□□ -0.29
Vcam1P29533 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.26□□□□□ -0.29
Vcam1P29533 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vcam1P29533 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vcam1P29533 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Gm13600-201ENSMUST00000117949 744 ntBASIC13.26□□□□□ -0.29
Vcam1P29533 Gm15617-201ENSMUST00000118973 771 ntBASIC13.26□□□□□ -0.29
Vcam1P29533 Gm13022-201ENSMUST00000121181 285 ntBASIC13.26□□□□□ -0.29
Vcam1P29533 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC13.26□□□□□ -0.29
Vcam1P29533 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC13.26□□□□□ -0.29
Vcam1P29533 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vcam1P29533 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vcam1P29533 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vcam1P29533 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vcam1P29533 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vcam1P29533 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vcam1P29533 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vcam1P29533 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.26□□□□□ -0.29
Vcam1P29533 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.26□□□□□ -0.29
Vcam1P29533 Gm28833-201ENSMUST00000189671 559 ntBASIC13.26□□□□□ -0.29
Vcam1P29533 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vcam1P29533 Gm42655-201ENSMUST00000202782 1134 ntBASIC13.26□□□□□ -0.29
Vcam1P29533 Gm43966-201ENSMUST00000203301 612 ntBASIC13.26□□□□□ -0.29
Vcam1P29533 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Vcam1P29533 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.26□□□□□ -0.29
Vcam1P29533 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vcam1P29533 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.26□□□□□ -0.29
Vcam1P29533 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Vcam1P29533 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcam1P29533 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.26□□□□□ -0.29
Vcam1P29533 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcam1P29533 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vcam1P29533 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcam1P29533 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcam1P29533 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vcam1P29533 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vcam1P29533 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vcam1P29533 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcam1P29533 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcam1P29533 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcam1P29533 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcam1P29533 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Vcam1P29533 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.25□□□□□ -0.29
Vcam1P29533 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vcam1P29533 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Vcam1P29533 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vcam1P29533 Gm11801-201ENSMUST00000117807 746 ntBASIC13.25□□□□□ -0.29
Vcam1P29533 Gm9133-201ENSMUST00000118289 540 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms