Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl6P27784 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl6P27784 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl6P27784 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
Ccl6P27784 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl6P27784 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl6P27784 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl6P27784 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
Ccl6P27784 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.01□□□□□ -0.97
Ccl6P27784 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Ccl6P27784 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Ccl6P27784 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.01□□□□□ -0.97
Ccl6P27784 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Ccl6P27784 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Ccl6P27784 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Gm6039-201ENSMUST00000121667 1250 ntBASIC9.01□□□□□ -0.97
Ccl6P27784 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Ccl6P27784 Gm2383-201ENSMUST00000181461 807 ntBASIC9.01□□□□□ -0.97
Ccl6P27784 Mir7677-201ENSMUST00000184226 67 ntBASIC9.01□□□□□ -0.97
Ccl6P27784 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.01□□□□□ -0.97
Ccl6P27784 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Gm45186-201ENSMUST00000206874 478 ntBASIC9.01□□□□□ -0.97
Ccl6P27784 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC9.01□□□□□ -0.97
Ccl6P27784 CT030182.1-201ENSMUST00000225935 533 ntBASIC9.01□□□□□ -0.97
Ccl6P27784 AC093022.1-201ENSMUST00000226949 1072 ntBASIC9.01□□□□□ -0.97
Ccl6P27784 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Ccl6P27784 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
Ccl6P27784 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.01□□□□□ -0.97
Ccl6P27784 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Ccl6P27784 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Ccl6P27784 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.01□□□□□ -0.97
Ccl6P27784 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.01□□□□□ -0.97
Ccl6P27784 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Ccl6P27784 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.01□□□□□ -0.97
Ccl6P27784 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Ccl6P27784 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC9.01□□□□□ -0.97
Ccl6P27784 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Ccl6P27784 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Ccl6P27784 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.01□□□□□ -0.97
Ccl6P27784 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccl6P27784 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9□□□□□ -0.97
Ccl6P27784 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Ccl6P27784 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9□□□□□ -0.97
Ccl6P27784 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Ccl6P27784 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9□□□□□ -0.97
Ccl6P27784 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9□□□□□ -0.97
Ccl6P27784 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9□□□□□ -0.97
Ccl6P27784 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Ccl6P27784 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms