Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.92□□□□□ -0.66
Clk1P22518 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Gm44914-201ENSMUST00000207191 2720 ntBASIC10.92□□□□□ -0.66
Clk1P22518 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.92□□□□□ -0.66
Clk1P22518 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clk1P22518 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Clk1P22518 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Clk1P22518 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Clk1P22518 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Clk1P22518 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Clk1P22518 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Clk1P22518 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.91□□□□□ -0.66
Clk1P22518 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.91□□□□□ -0.66
Clk1P22518 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.91□□□□□ -0.66
Clk1P22518 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Clk1P22518 Gm7584-201ENSMUST00000175829 940 ntBASIC10.91□□□□□ -0.66
Clk1P22518 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.91□□□□□ -0.66
Clk1P22518 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.91□□□□□ -0.66
Clk1P22518 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.91□□□□□ -0.66
Clk1P22518 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.91□□□□□ -0.66
Clk1P22518 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Clk1P22518 Gm8956-201ENSMUST00000203939 825 ntBASIC10.91□□□□□ -0.66
Clk1P22518 Gm44967-201ENSMUST00000207047 631 ntBASIC10.91□□□□□ -0.66
Clk1P22518 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.91□□□□□ -0.66
Clk1P22518 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.91□□□□□ -0.66
Clk1P22518 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Clk1P22518 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Gm5455-201ENSMUST00000058710 715 ntBASIC10.91□□□□□ -0.66
Clk1P22518 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.91□□□□□ -0.66
Clk1P22518 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.91□□□□□ -0.66
Clk1P22518 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.91□□□□□ -0.66
Clk1P22518 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clk1P22518 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Clk1P22518 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.9□□□□□ -0.66
Clk1P22518 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.9□□□□□ -0.66
Clk1P22518 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Gm37873-201ENSMUST00000194571 2280 ntBASIC10.9□□□□□ -0.66
Clk1P22518 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.9□□□□□ -0.66
Clk1P22518 Gm26286-201ENSMUST00000104166 134 ntBASIC10.9□□□□□ -0.66
Clk1P22518 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Clk1P22518 Gm13996-201ENSMUST00000118456 430 ntBASIC10.9□□□□□ -0.66
Clk1P22518 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.9□□□□□ -0.66
Clk1P22518 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.9□□□□□ -0.66
Clk1P22518 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.9□□□□□ -0.66
Clk1P22518 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.9□□□□□ -0.66
Clk1P22518 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.9□□□□□ -0.66
Clk1P22518 Gm43962-201ENSMUST00000203898 190 ntBASIC10.9□□□□□ -0.66
Clk1P22518 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Clk1P22518 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.9□□□□□ -0.66
Clk1P22518 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clk1P22518 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Clk1P22518 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Clk1P22518 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Clk1P22518 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms