Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Gm18056-201ENSMUST00000207670 568 ntBASIC10.12□□□□□ -0.79
PtcraP0C6B2 Gm18061-201ENSMUST00000208350 562 ntBASIC10.12□□□□□ -0.79
PtcraP0C6B2 Gm18063-201ENSMUST00000208529 568 ntBASIC10.12□□□□□ -0.79
PtcraP0C6B2 Gm18052-201ENSMUST00000208750 559 ntBASIC10.12□□□□□ -0.79
PtcraP0C6B2 Gm19208-201ENSMUST00000213861 912 ntBASIC10.12□□□□□ -0.79
PtcraP0C6B2 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.12□□□□□ -0.79
PtcraP0C6B2 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 CT009754.4-201ENSMUST00000221430 565 ntBASIC10.12□□□□□ -0.79
PtcraP0C6B2 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.12□□□□□ -0.79
PtcraP0C6B2 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.12□□□□□ -0.79
PtcraP0C6B2 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.12□□□□□ -0.79
PtcraP0C6B2 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.12□□□□□ -0.79
PtcraP0C6B2 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.12□□□□□ -0.79
PtcraP0C6B2 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.12□□□□□ -0.79
PtcraP0C6B2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PtcraP0C6B2 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.11□□□□□ -0.79
PtcraP0C6B2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.11□□□□□ -0.79
PtcraP0C6B2 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Gm23200-201ENSMUST00000104379 132 ntBASIC10.11□□□□□ -0.79
PtcraP0C6B2 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Gm14058-201ENSMUST00000116082 735 ntBASIC10.11□□□□□ -0.79
PtcraP0C6B2 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.11□□□□□ -0.79
PtcraP0C6B2 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Gm3329-201ENSMUST00000159873 556 ntBASIC10.11□□□□□ -0.79
PtcraP0C6B2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.11□□□□□ -0.79
PtcraP0C6B2 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.11□□□□□ -0.79
PtcraP0C6B2 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Gm7848-201ENSMUST00000210739 718 ntBASIC10.11□□□□□ -0.79
PtcraP0C6B2 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Ntng1-201ENSMUST00000051253 327 ntBASIC10.11□□□□□ -0.79
PtcraP0C6B2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
PtcraP0C6B2 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms