Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Mir5132-201ENSMUST00000175166 71 ntBASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp6P0C0A3 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Gm18734-201ENSMUST00000172937 808 ntBASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Gm8100-201ENSMUST00000182906 988 ntBASIC12.62□□□□□ -0.39
Chmp6P0C0A3 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp6P0C0A3 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Gm14441-201ENSMUST00000121960 540 ntBASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 B9d1os-201ENSMUST00000137010 674 ntBASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Mir5120-201ENSMUST00000175020 78 ntBASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Gm37246-201ENSMUST00000192665 835 ntBASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp6P0C0A3 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms