Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hoxc9P09633 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hoxc9P09633 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hoxc9P09633 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Hoxc9P09633 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Gm9244-201ENSMUST00000056767 2129 ntBASIC14.93□□□□□ -0.02
Hoxc9P09633 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Hoxc9P09633 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC14.93□□□□□ -0.02
Hoxc9P09633 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Hoxc9P09633 Gm14274-201ENSMUST00000117182 615 ntBASIC14.93□□□□□ -0.02
Hoxc9P09633 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Hoxc9P09633 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Hoxc9P09633 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Gm44814-201ENSMUST00000207018 434 ntBASIC14.93□□□□□ -0.02
Hoxc9P09633 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC14.93□□□□□ -0.02
Hoxc9P09633 AC122024.3-201ENSMUST00000217719 294 ntBASIC14.93□□□□□ -0.02
Hoxc9P09633 Gm9102-201ENSMUST00000219250 465 ntBASIC14.93□□□□□ -0.02
Hoxc9P09633 Gm18499-201ENSMUST00000220808 1021 ntBASIC14.93□□□□□ -0.02
Hoxc9P09633 AC115304.2-201ENSMUST00000226399 332 ntBASIC14.93□□□□□ -0.02
Hoxc9P09633 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Hoxc9P09633 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.93□□□□□ -0.02
Hoxc9P09633 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Hoxc9P09633 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Hoxc9P09633 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.93□□□□□ -0.02
Hoxc9P09633 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC14.93□□□□□ -0.02
Hoxc9P09633 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxc9P09633 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Hoxc9P09633 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.92□□□□□ -0.02
Hoxc9P09633 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Hoxc9P09633 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Hoxc9P09633 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC14.92□□□□□ -0.02
Hoxc9P09633 Gm14165-201ENSMUST00000121456 952 ntBASIC14.92□□□□□ -0.02
Hoxc9P09633 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Gm22846-201ENSMUST00000157706 270 ntBASIC14.92□□□□□ -0.02
Hoxc9P09633 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Hoxc9P09633 Gm8451-201ENSMUST00000170338 447 ntBASIC14.92□□□□□ -0.02
Hoxc9P09633 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Hoxc9P09633 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Mir7035-201ENSMUST00000184713 82 ntBASIC14.92□□□□□ -0.02
Hoxc9P09633 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Hoxc9P09633 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Capsl-202ENSMUST00000226688 739 ntBASIC14.92□□□□□ -0.02
Hoxc9P09633 AC159002.1-201ENSMUST00000226714 924 ntBASIC14.92□□□□□ -0.02
Hoxc9P09633 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Hoxc9P09633 Gm7536-201ENSMUST00000077389 444 ntBASIC14.92□□□□□ -0.02
Hoxc9P09633 Gm5453-201ENSMUST00000080866 447 ntBASIC14.92□□□□□ -0.02
Hoxc9P09633 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Hoxc9P09633 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.92□□□□□ -0.02
Hoxc9P09633 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Hoxc9P09633 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.92□□□□□ -0.02
Hoxc9P09633 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxc9P09633 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxc9P09633 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms