Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc8P09025 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Hoxc8P09025 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc8P09025 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc8P09025 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Hoxc8P09025 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc8P09025 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc8P09025 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hoxc8P09025 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.27□□□□□ -0.45
Hoxc8P09025 Gm23612-201ENSMUST00000103823 110 ntBASIC12.27□□□□□ -0.45
Hoxc8P09025 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Hoxc8P09025 Gm4917-201ENSMUST00000121452 650 ntBASIC12.27□□□□□ -0.45
Hoxc8P09025 Gm12453-201ENSMUST00000121981 331 ntBASIC12.27□□□□□ -0.45
Hoxc8P09025 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Gm23576-201ENSMUST00000179918 110 ntBASIC12.27□□□□□ -0.45
Hoxc8P09025 Mir6923-201ENSMUST00000184592 72 ntBASIC12.27□□□□□ -0.45
Hoxc8P09025 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.27□□□□□ -0.45
Hoxc8P09025 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hoxc8P09025 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.27□□□□□ -0.45
Hoxc8P09025 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.27□□□□□ -0.45
Hoxc8P09025 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc8P09025 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Hoxc8P09025 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Hoxc8P09025 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.26□□□□□ -0.45
Hoxc8P09025 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Hoxc8P09025 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.26□□□□□ -0.45
Hoxc8P09025 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxc8P09025 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.26□□□□□ -0.45
Hoxc8P09025 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hoxc8P09025 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxc8P09025 Gm15196-201ENSMUST00000121406 482 ntBASIC12.26□□□□□ -0.45
Hoxc8P09025 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxc8P09025 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.26□□□□□ -0.45
Hoxc8P09025 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.26□□□□□ -0.45
Hoxc8P09025 Mir7035-201ENSMUST00000184713 82 ntBASIC12.26□□□□□ -0.45
Hoxc8P09025 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxc8P09025 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.26□□□□□ -0.45
Hoxc8P09025 Gm7589-201ENSMUST00000085631 534 ntBASIC12.26□□□□□ -0.45
Hoxc8P09025 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Hoxc8P09025 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hoxc8P09025 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.26□□□□□ -0.45
Hoxc8P09025 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hoxc8P09025 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hoxc8P09025 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.26□□□□□ -0.45
Hoxc8P09025 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.26□□□□□ -0.45
Hoxc8P09025 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc8P09025 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.25□□□□□ -0.45
Hoxc8P09025 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc8P09025 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc8P09025 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc8P09025 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc8P09025 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc8P09025 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc8P09025 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc8P09025 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc8P09025 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc8P09025 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.25□□□□□ -0.45
Hoxc8P09025 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc8P09025 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hoxc8P09025 Gm11619-201ENSMUST00000117474 237 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms