Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hoxa3P02831 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
Hoxa3P02831 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hoxa3P02831 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.76□□□□□ -0.85
Hoxa3P02831 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hoxa3P02831 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hoxa3P02831 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hoxa3P02831 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hoxa3P02831 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hoxa3P02831 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.75□□□□□ -0.85
Hoxa3P02831 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.75□□□□□ -0.85
Hoxa3P02831 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
Hoxa3P02831 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Hoxa3P02831 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Hoxa3P02831 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.75□□□□□ -0.85
Hoxa3P02831 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Hoxa3P02831 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Hoxa3P02831 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.75□□□□□ -0.85
Hoxa3P02831 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.75□□□□□ -0.85
Hoxa3P02831 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
Hoxa3P02831 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Hoxa3P02831 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Hoxa3P02831 Gm13263-201ENSMUST00000121271 838 ntBASIC9.75□□□□□ -0.85
Hoxa3P02831 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Gm22144-201ENSMUST00000157402 102 ntBASIC9.75□□□□□ -0.85
Hoxa3P02831 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.75□□□□□ -0.85
Hoxa3P02831 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC9.75□□□□□ -0.85
Hoxa3P02831 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC9.75□□□□□ -0.85
Hoxa3P02831 Gm5714-201ENSMUST00000197343 566 ntBASIC9.75□□□□□ -0.85
Hoxa3P02831 Gm43916-201ENSMUST00000205062 967 ntBASIC9.75□□□□□ -0.85
Hoxa3P02831 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.75□□□□□ -0.85
Hoxa3P02831 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 AC166344.1-201ENSMUST00000223745 674 ntBASIC9.75□□□□□ -0.85
Hoxa3P02831 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Hoxa3P02831 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC9.75□□□□□ -0.85
Hoxa3P02831 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Hoxa3P02831 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Hoxa3P02831 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Hoxa3P02831 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.75□□□□□ -0.85
Hoxa3P02831 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC9.75□□□□□ -0.85
Hoxa3P02831 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.75□□□□□ -0.85
Hoxa3P02831 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hoxa3P02831 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.74□□□□□ -0.85
Hoxa3P02831 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxa3P02831 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxa3P02831 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxa3P02831 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxa3P02831 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxa3P02831 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxa3P02831 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxa3P02831 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxa3P02831 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxa3P02831 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxa3P02831 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxa3P02831 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxa3P02831 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxa3P02831 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxa3P02831 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
Hoxa3P02831 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hoxa3P02831 Gm8731-201ENSMUST00000118088 412 ntBASIC9.74□□□□□ -0.85
Hoxa3P02831 Gm15131-201ENSMUST00000119124 595 ntBASIC9.74□□□□□ -0.85
Hoxa3P02831 Gm11667-201ENSMUST00000119828 486 ntBASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms