Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Psmc3O88685 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Psmc3O88685 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.29□□□□□ -0.44
Psmc3O88685 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.29□□□□□ -0.44
Psmc3O88685 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Psmc3O88685 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Psmc3O88685 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Psmc3O88685 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Psmc3O88685 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Psmc3O88685 Gm25766-201ENSMUST00000104101 131 ntBASIC12.28□□□□□ -0.44
Psmc3O88685 Gm11801-201ENSMUST00000117807 746 ntBASIC12.28□□□□□ -0.44
Psmc3O88685 Gm13600-201ENSMUST00000117949 744 ntBASIC12.28□□□□□ -0.44
Psmc3O88685 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.28□□□□□ -0.44
Psmc3O88685 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.28□□□□□ -0.44
Psmc3O88685 Gm9136-201ENSMUST00000193368 454 ntBASIC12.28□□□□□ -0.44
Psmc3O88685 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.28□□□□□ -0.44
Psmc3O88685 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.28□□□□□ -0.44
Psmc3O88685 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.28□□□□□ -0.44
Psmc3O88685 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.28□□□□□ -0.44
Psmc3O88685 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Psmc3O88685 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Psmc3O88685 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Psmc3O88685 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.28□□□□□ -0.44
Psmc3O88685 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Psmc3O88685 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Psmc3O88685 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Psmc3O88685 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Psmc3O88685 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Psmc3O88685 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Psmc3O88685 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Psmc3O88685 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Psmc3O88685 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.27□□□□□ -0.44
Psmc3O88685 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Psmc3O88685 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Psmc3O88685 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Psmc3O88685 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Psmc3O88685 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Psmc3O88685 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Psmc3O88685 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Psmc3O88685 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Psmc3O88685 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Psmc3O88685 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Psmc3O88685 Mir6407-201ENSMUST00000184510 101 ntBASIC12.27□□□□□ -0.45
Psmc3O88685 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.27□□□□□ -0.45
Psmc3O88685 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.27□□□□□ -0.45
Psmc3O88685 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.27□□□□□ -0.45
Psmc3O88685 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Psmc3O88685 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.27□□□□□ -0.45
Psmc3O88685 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.27□□□□□ -0.45
Psmc3O88685 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Psmc3O88685 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.27□□□□□ -0.45
Psmc3O88685 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Psmc3O88685 Map1b-203ENSMUST00000223725 2669 ntBASIC12.27□□□□□ -0.45
Psmc3O88685 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Psmc3O88685 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Psmc3O88685 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Psmc3O88685 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.27□□□□□ -0.45
Psmc3O88685 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Psmc3O88685 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Psmc3O88685 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Psmc3O88685 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Psmc3O88685 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Psmc3O88685 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Psmc3O88685 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Psmc3O88685 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Psmc3O88685 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Psmc3O88685 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.26□□□□□ -0.45
Psmc3O88685 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.26□□□□□ -0.45
Psmc3O88685 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Psmc3O88685 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms