Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trdmt1O55055 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trdmt1O55055 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trdmt1O55055 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Trdmt1O55055 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trdmt1O55055 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.75□□□□□ -0.37
Trdmt1O55055 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trdmt1O55055 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Paupar-201ENSMUST00000194826 3482 ntBASIC12.74□□□□□ -0.37
Trdmt1O55055 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Trdmt1O55055 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.74□□□□□ -0.37
Trdmt1O55055 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trdmt1O55055 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trdmt1O55055 Mir1905-201ENSMUST00000122779 82 ntBASIC12.74□□□□□ -0.37
Trdmt1O55055 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.74□□□□□ -0.37
Trdmt1O55055 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Gm43778-201ENSMUST00000199438 199 ntBASIC12.74□□□□□ -0.37
Trdmt1O55055 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.74□□□□□ -0.37
Trdmt1O55055 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Gm45856-201ENSMUST00000212752 416 ntBASIC12.74□□□□□ -0.37
Trdmt1O55055 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.74□□□□□ -0.37
Trdmt1O55055 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.74□□□□□ -0.37
Trdmt1O55055 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trdmt1O55055 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trdmt1O55055 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trdmt1O55055 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trdmt1O55055 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Trdmt1O55055 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trdmt1O55055 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.73□□□□□ -0.37
Trdmt1O55055 Gm12218-201ENSMUST00000117666 399 ntBASIC12.73□□□□□ -0.37
Trdmt1O55055 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.73□□□□□ -0.37
Trdmt1O55055 Gm15003-201ENSMUST00000118884 446 ntBASIC12.73□□□□□ -0.37
Trdmt1O55055 Gm14213-201ENSMUST00000119778 768 ntBASIC12.73□□□□□ -0.37
Trdmt1O55055 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.73□□□□□ -0.37
Trdmt1O55055 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.73□□□□□ -0.37
Trdmt1O55055 Gm8451-201ENSMUST00000170338 447 ntBASIC12.73□□□□□ -0.37
Trdmt1O55055 Gm24809-201ENSMUST00000175318 271 ntBASIC12.73□□□□□ -0.37
Trdmt1O55055 Gm7719-201ENSMUST00000182374 975 ntBASIC12.73□□□□□ -0.37
Trdmt1O55055 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.73□□□□□ -0.37
Trdmt1O55055 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.73□□□□□ -0.37
Trdmt1O55055 Gm30946-201ENSMUST00000198288 724 ntBASIC12.73□□□□□ -0.37
Trdmt1O55055 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.73□□□□□ -0.37
Trdmt1O55055 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.73□□□□□ -0.37
Trdmt1O55055 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.73□□□□□ -0.37
Trdmt1O55055 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.73□□□□□ -0.37
Trdmt1O55055 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 Gm7536-201ENSMUST00000077389 444 ntBASIC12.73□□□□□ -0.37
Trdmt1O55055 Gm5453-201ENSMUST00000080866 447 ntBASIC12.73□□□□□ -0.37
Trdmt1O55055 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trdmt1O55055 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trdmt1O55055 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.73□□□□□ -0.37
Trdmt1O55055 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trdmt1O55055 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Trdmt1O55055 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trdmt1O55055 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdmt1O55055 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trdmt1O55055 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdmt1O55055 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms