Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Gm7940-201ENSMUST00000218195 769 ntBASIC13.74□□□□□ -0.21
Smarce1O54941 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.74□□□□□ -0.21
Smarce1O54941 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Smarce1O54941 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.74□□□□□ -0.21
Smarce1O54941 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Smarce1O54941 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.74□□□□□ -0.21
Smarce1O54941 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarce1O54941 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Smarce1O54941 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Smarce1O54941 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarce1O54941 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarce1O54941 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarce1O54941 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarce1O54941 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarce1O54941 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarce1O54941 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarce1O54941 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.73□□□□□ -0.21
Smarce1O54941 Gm4310-201ENSMUST00000177847 889 ntBASIC13.73□□□□□ -0.21
Smarce1O54941 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC13.73□□□□□ -0.21
Smarce1O54941 Gm27516-201ENSMUST00000184237 98 ntBASIC13.73□□□□□ -0.21
Smarce1O54941 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.73□□□□□ -0.21
Smarce1O54941 Gm38266-201ENSMUST00000194931 421 ntBASIC13.73□□□□□ -0.21
Smarce1O54941 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Smarce1O54941 Gm6439-201ENSMUST00000199849 862 ntBASIC13.73□□□□□ -0.21
Smarce1O54941 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.73□□□□□ -0.21
Smarce1O54941 Gm13097-201ENSMUST00000210722 397 ntBASIC13.73□□□□□ -0.21
Smarce1O54941 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarce1O54941 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarce1O54941 Cts7-204ENSMUST00000225321 1257 ntBASIC13.73□□□□□ -0.21
Smarce1O54941 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarce1O54941 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarce1O54941 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Smarce1O54941 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarce1O54941 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarce1O54941 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarce1O54941 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.73□□□□□ -0.21
Smarce1O54941 Gm19178-201ENSMUST00000217524 1819 ntBASIC13.73□□□□□ -0.21
Smarce1O54941 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Smarce1O54941 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarce1O54941 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarce1O54941 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarce1O54941 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.72□□□□□ -0.21
Smarce1O54941 Gm21939-201ENSMUST00000221137 2773 ntBASIC13.72□□□□□ -0.21
Smarce1O54941 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Gm43522-201ENSMUST00000196697 1922 ntBASIC13.72□□□□□ -0.21
Smarce1O54941 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.72□□□□□ -0.21
Smarce1O54941 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.72□□□□□ -0.21
Smarce1O54941 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.72□□□□□ -0.21
Smarce1O54941 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.72□□□□□ -0.21
Smarce1O54941 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.72□□□□□ -0.21
Smarce1O54941 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Smarce1O54941 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.72□□□□□ -0.21
Smarce1O54941 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.72□□□□□ -0.21
Smarce1O54941 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.72□□□□□ -0.21
Smarce1O54941 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.72□□□□□ -0.21
Smarce1O54941 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Smarce1O54941 Gm45865-201ENSMUST00000211815 945 ntBASIC13.72□□□□□ -0.21
Smarce1O54941 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Smarce1O54941 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Smarce1O54941 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.72□□□□□ -0.21
Smarce1O54941 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Smarce1O54941 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms