Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.33□□□□□ -0.6
Npc1O35604 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.33□□□□□ -0.6
Npc1O35604 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Npc1O35604 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.32□□□□□ -0.6
Npc1O35604 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Npc1O35604 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.32□□□□□ -0.6
Npc1O35604 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Npc1O35604 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Npc1O35604 Gm14193-201ENSMUST00000105067 153 ntBASIC11.32□□□□□ -0.6
Npc1O35604 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.32□□□□□ -0.6
Npc1O35604 Gm11783-201ENSMUST00000119549 885 ntBASIC11.32□□□□□ -0.6
Npc1O35604 Gm15566-201ENSMUST00000121130 590 ntBASIC11.32□□□□□ -0.6
Npc1O35604 Gm8737-201ENSMUST00000122208 642 ntBASIC11.32□□□□□ -0.6
Npc1O35604 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.32□□□□□ -0.6
Npc1O35604 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Npc1O35604 Gm9540-201ENSMUST00000188230 478 ntBASIC11.32□□□□□ -0.6
Npc1O35604 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.32□□□□□ -0.6
Npc1O35604 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.32□□□□□ -0.6
Npc1O35604 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.32□□□□□ -0.6
Npc1O35604 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Npc1O35604 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Npc1O35604 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Npc1O35604 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.32□□□□□ -0.6
Npc1O35604 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Npc1O35604 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Npc1O35604 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Npc1O35604 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Npc1O35604 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npc1O35604 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npc1O35604 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Npc1O35604 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npc1O35604 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npc1O35604 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npc1O35604 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Npc1O35604 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Npc1O35604 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npc1O35604 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npc1O35604 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npc1O35604 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Npc1O35604 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Npc1O35604 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.31□□□□□ -0.6
Npc1O35604 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Npc1O35604 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.31□□□□□ -0.6
Npc1O35604 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.31□□□□□ -0.6
Npc1O35604 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Npc1O35604 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Npc1O35604 Mir7686-201ENSMUST00000200604 57 ntBASIC11.31□□□□□ -0.6
Npc1O35604 Gm9555-201ENSMUST00000200908 583 ntBASIC11.31□□□□□ -0.6
Npc1O35604 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.31□□□□□ -0.6
Npc1O35604 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.31□□□□□ -0.6
Npc1O35604 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npc1O35604 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npc1O35604 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.31□□□□□ -0.6
Npc1O35604 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Npc1O35604 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.31□□□□□ -0.6
Npc1O35604 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Npc1O35604 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Npc1O35604 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.31□□□□□ -0.6
Npc1O35604 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Npc1O35604 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.31□□□□□ -0.6
Npc1O35604 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms