Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 AC152169.1-201ENSMUST00000223901 701 ntBASIC17.53■□□□□ 0.4
Polr1aO35134 CT025689.1-201ENSMUST00000225214 283 ntBASIC17.53■□□□□ 0.4
Polr1aO35134 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC17.53■□□□□ 0.4
Polr1aO35134 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC17.53■□□□□ 0.4
Polr1aO35134 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Polr1aO35134 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Polr1aO35134 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC17.53■□□□□ 0.4
Polr1aO35134 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Polr1aO35134 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC17.52■□□□□ 0.4
Polr1aO35134 Gm14592-201ENSMUST00000117201 560 ntBASIC17.52■□□□□ 0.4
Polr1aO35134 Gm15625-201ENSMUST00000117617 1093 ntBASIC17.52■□□□□ 0.4
Polr1aO35134 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC17.52■□□□□ 0.4
Polr1aO35134 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Polr1aO35134 Gm25872-201ENSMUST00000177784 100 ntBASIC17.52■□□□□ 0.4
Polr1aO35134 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Polr1aO35134 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Polr1aO35134 Gm7192-201ENSMUST00000210793 1137 ntBASIC17.52■□□□□ 0.4
Polr1aO35134 AC154759.1-201ENSMUST00000224137 1159 ntBASIC17.52■□□□□ 0.4
Polr1aO35134 Gm9791-201ENSMUST00000060997 447 ntBASIC17.52■□□□□ 0.4
Polr1aO35134 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Polr1aO35134 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Polr1aO35134 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Polr1aO35134 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Polr1aO35134 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Polr1aO35134 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Polr1aO35134 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Polr1aO35134 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Polr1aO35134 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Polr1aO35134 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Polr1aO35134 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Polr1aO35134 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC17.52■□□□□ 0.39
Polr1aO35134 Gm13827-201ENSMUST00000148801 372 ntBASIC17.52■□□□□ 0.39
Polr1aO35134 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Polr1aO35134 Gm23675-201ENSMUST00000157311 125 ntBASIC17.52■□□□□ 0.39
Polr1aO35134 Gm5210-201ENSMUST00000182150 1010 ntBASIC17.52■□□□□ 0.39
Polr1aO35134 Gm42732-201ENSMUST00000202887 1197 ntBASIC17.52■□□□□ 0.39
Polr1aO35134 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.39
Polr1aO35134 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Polr1aO35134 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Polr1aO35134 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Polr1aO35134 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Polr1aO35134 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
Polr1aO35134 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Polr1aO35134 Gm44755-201ENSMUST00000207830 2102 ntBASIC17.51■□□□□ 0.39
Polr1aO35134 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Polr1aO35134 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Polr1aO35134 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Polr1aO35134 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Polr1aO35134 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Polr1aO35134 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC17.51■□□□□ 0.39
Polr1aO35134 Gm8601-201ENSMUST00000182096 909 ntBASIC17.51■□□□□ 0.39
Polr1aO35134 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Polr1aO35134 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Polr1aO35134 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Polr1aO35134 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Polr1aO35134 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Polr1aO35134 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Polr1aO35134 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Polr1aO35134 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Polr1aO35134 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Polr1aO35134 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Polr1aO35134 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Polr1aO35134 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Polr1aO35134 Gm43570-201ENSMUST00000199951 3688 ntBASIC17.5■□□□□ 0.39
Polr1aO35134 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Gm23769-201ENSMUST00000104441 121 ntBASIC17.5■□□□□ 0.39
Polr1aO35134 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC17.5■□□□□ 0.39
Polr1aO35134 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC17.5■□□□□ 0.39
Polr1aO35134 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC17.5■□□□□ 0.39
Polr1aO35134 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC17.5■□□□□ 0.39
Polr1aO35134 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Polr1aO35134 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Polr1aO35134 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Polr1aO35134 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Polr1aO35134 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC17.5■□□□□ 0.39
Polr1aO35134 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Polr1aO35134 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms