Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gm11952-201ENSMUST00000121172 821 ntBASIC10.92□□□□□ -0.66
Colca2F8VPY8 Gm4917-201ENSMUST00000121452 650 ntBASIC10.92□□□□□ -0.66
Colca2F8VPY8 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Gm16547-201ENSMUST00000159474 293 ntBASIC10.92□□□□□ -0.66
Colca2F8VPY8 Gm3329-201ENSMUST00000159873 556 ntBASIC10.92□□□□□ -0.66
Colca2F8VPY8 Gm16165-201ENSMUST00000160140 795 ntBASIC10.92□□□□□ -0.66
Colca2F8VPY8 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.92□□□□□ -0.66
Colca2F8VPY8 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Gm19918-201ENSMUST00000194858 400 ntBASIC10.92□□□□□ -0.66
Colca2F8VPY8 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC10.92□□□□□ -0.66
Colca2F8VPY8 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.92□□□□□ -0.66
Colca2F8VPY8 Gm18123-201ENSMUST00000210874 822 ntBASIC10.92□□□□□ -0.66
Colca2F8VPY8 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.92□□□□□ -0.66
Colca2F8VPY8 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.92□□□□□ -0.66
Colca2F8VPY8 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.92□□□□□ -0.66
Colca2F8VPY8 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Colca2F8VPY8 Gm42970-201ENSMUST00000196407 1352 ntBASIC10.91□□□□□ -0.66
Colca2F8VPY8 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Gm13171-201ENSMUST00000117233 391 ntBASIC10.91□□□□□ -0.66
Colca2F8VPY8 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Gm14034-201ENSMUST00000120147 551 ntBASIC10.91□□□□□ -0.66
Colca2F8VPY8 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Gm25872-201ENSMUST00000177784 100 ntBASIC10.91□□□□□ -0.66
Colca2F8VPY8 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Gm8234-201ENSMUST00000198523 1107 ntBASIC10.91□□□□□ -0.66
Colca2F8VPY8 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.91□□□□□ -0.66
Colca2F8VPY8 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Gm45481-201ENSMUST00000209717 877 ntBASIC10.91□□□□□ -0.66
Colca2F8VPY8 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 CT025603.1-201ENSMUST00000224040 448 ntBASIC10.91□□□□□ -0.66
Colca2F8VPY8 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 AC154407.1-201ENSMUST00000226777 526 ntBASIC10.91□□□□□ -0.66
Colca2F8VPY8 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Gm10020-201ENSMUST00000081993 612 ntBASIC10.91□□□□□ -0.66
Colca2F8VPY8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Colca2F8VPY8 Prss23os-202ENSMUST00000179361 1362 ntBASIC10.9□□□□□ -0.66
Colca2F8VPY8 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Colca2F8VPY8 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Colca2F8VPY8 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC10.9□□□□□ -0.66
Colca2F8VPY8 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Colca2F8VPY8 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Colca2F8VPY8 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Colca2F8VPY8 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms