Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdh9F8VPK8 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Gm17812-201ENSMUST00000204935 318 ntBASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh9F8VPK8 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Gm14130-201ENSMUST00000118417 987 ntBASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh9F8VPK8 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms