Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm45113-201ENSMUST00000207518 165 ntBASIC11.91□□□□□ -0.5
Atf6F6VAN0 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.91□□□□□ -0.5
Atf6F6VAN0 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.91□□□□□ -0.5
Atf6F6VAN0 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.91□□□□□ -0.5
Atf6F6VAN0 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.91□□□□□ -0.5
Atf6F6VAN0 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.91□□□□□ -0.5
Atf6F6VAN0 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Atf6F6VAN0 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.9□□□□□ -0.5
Atf6F6VAN0 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.9□□□□□ -0.5
Atf6F6VAN0 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Gm14017-201ENSMUST00000121934 386 ntBASIC11.9□□□□□ -0.5
Atf6F6VAN0 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Gm25881-201ENSMUST00000157783 103 ntBASIC11.9□□□□□ -0.5
Atf6F6VAN0 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.9□□□□□ -0.5
Atf6F6VAN0 Gm45575-201ENSMUST00000210283 548 ntBASIC11.9□□□□□ -0.5
Atf6F6VAN0 Gm18212-201ENSMUST00000211678 889 ntBASIC11.9□□□□□ -0.5
Atf6F6VAN0 Gm18065-201ENSMUST00000221395 526 ntBASIC11.9□□□□□ -0.5
Atf6F6VAN0 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Atf6F6VAN0 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Gm10254-201ENSMUST00000052888 867 ntBASIC11.9□□□□□ -0.5
Atf6F6VAN0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atf6F6VAN0 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Atf6F6VAN0 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Atf6F6VAN0 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.89□□□□□ -0.51
Atf6F6VAN0 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf6F6VAN0 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.89□□□□□ -0.51
Atf6F6VAN0 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.89□□□□□ -0.51
Atf6F6VAN0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Gm11783-201ENSMUST00000119549 885 ntBASIC11.89□□□□□ -0.51
Atf6F6VAN0 Gm8566-201ENSMUST00000120174 465 ntBASIC11.89□□□□□ -0.51
Atf6F6VAN0 Gm14277-201ENSMUST00000121195 360 ntBASIC11.89□□□□□ -0.51
Atf6F6VAN0 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Gm8815-201ENSMUST00000173809 620 ntBASIC11.89□□□□□ -0.51
Atf6F6VAN0 Gm2383-201ENSMUST00000181461 807 ntBASIC11.89□□□□□ -0.51
Atf6F6VAN0 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Atf6F6VAN0 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.89□□□□□ -0.51
Atf6F6VAN0 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms