Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Gm5714-201ENSMUST00000197343 566 ntBASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Gm3726-201ENSMUST00000203110 785 ntBASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Gm43912-201ENSMUST00000204352 538 ntBASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Gm45085-201ENSMUST00000209100 441 ntBASIC13.08□□□□□ -0.32
Syngap1F6SEU4 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Syngap1F6SEU4 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Gm25076-201ENSMUST00000104098 132 ntBASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Gm16459-201ENSMUST00000121443 686 ntBASIC13.07□□□□□ -0.32
Syngap1F6SEU4 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Gm38007-201ENSMUST00000192187 313 ntBASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.07□□□□□ -0.32
Syngap1F6SEU4 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Gm6304-201ENSMUST00000096579 447 ntBASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Map1b-203ENSMUST00000223725 2669 ntBASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.07□□□□□ -0.32
Syngap1F6SEU4 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Gm11560-201ENSMUST00000117567 948 ntBASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Gm14993-201ENSMUST00000121180 164 ntBASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Gm4310-201ENSMUST00000177847 889 ntBASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Gm6331-201ENSMUST00000217890 450 ntBASIC13.06□□□□□ -0.32
Syngap1F6SEU4 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 CT030652.1-201ENSMUST00000227377 1235 ntBASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syngap1F6SEU4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syngap1F6SEU4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syngap1F6SEU4 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Syngap1F6SEU4 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Syngap1F6SEU4 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Syngap1F6SEU4 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms