Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm5046-201ENSMUST00000100608 611 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 n-R5s51-201ENSMUST00000104473 123 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm12746-201ENSMUST00000151369 615 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm17107-201ENSMUST00000170983 553 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm6723-201ENSMUST00000180449 441 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm38328-201ENSMUST00000195582 317 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm42710-201ENSMUST00000200608 985 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Acsl6-203ENSMUST00000072178 2432 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm5174-201ENSMUST00000171131 1423 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm36595-201ENSMUST00000218830 2006 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Rab7b-201ENSMUST00000064664 1672 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm12452-201ENSMUST00000117128 331 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm26407-201ENSMUST00000158504 307 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm6686-201ENSMUST00000178455 258 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm38306-201ENSMUST00000193954 237 ntBASIC6.24□□□□□ -1.41
Herc1E9PZP8 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Gm11149-202ENSMUST00000215070 1169 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 1700010B08Rik-201ENSMUST00000073081 899 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Herc1E9PZP8 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Gm9430-201ENSMUST00000121232 1527 ntBASIC6.23□□□□□ -1.41
Herc1E9PZP8 Gm43225-201ENSMUST00000201381 1439 ntBASIC6.23□□□□□ -1.41
Herc1E9PZP8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Gm5385-201ENSMUST00000118988 1559 ntBASIC6.23□□□□□ -1.41
Herc1E9PZP8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Trex1-202ENSMUST00000112053 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Gm12220-201ENSMUST00000118476 172 ntBASIC6.23□□□□□ -1.41
Herc1E9PZP8 Gm13864-201ENSMUST00000119745 785 ntBASIC6.23□□□□□ -1.41
Herc1E9PZP8 Gm11307-201ENSMUST00000121088 929 ntBASIC6.23□□□□□ -1.41
Herc1E9PZP8 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC6.23□□□□□ -1.41
Herc1E9PZP8 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Trav9n-1-201ENSMUST00000185224 339 ntBASIC6.23□□□□□ -1.41
Herc1E9PZP8 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Gm29725-201ENSMUST00000206614 407 ntBASIC6.23□□□□□ -1.41
Herc1E9PZP8 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Gm46189-201ENSMUST00000219395 644 ntTSL 3 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Gm7664-201ENSMUST00000221988 745 ntBASIC6.23□□□□□ -1.41
Herc1E9PZP8 Trap1a-201ENSMUST00000054534 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Pde7a-203ENSMUST00000121951 382 ntTSL 3 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Gm11493-201ENSMUST00000134567 566 ntTSL 3 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Gm17084-201ENSMUST00000163843 511 ntBASIC6.23□□□□□ -1.41
Herc1E9PZP8 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Gm29372-201ENSMUST00000191416 364 ntBASIC6.23□□□□□ -1.41
Herc1E9PZP8 Gm5043-201ENSMUST00000202103 820 ntBASIC6.23□□□□□ -1.41
Herc1E9PZP8 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Clec10a-202ENSMUST00000102571 1496 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Herc1E9PZP8 Zcchc9-201ENSMUST00000022121 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms