Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Gm13700-201ENSMUST00000118624 1128 ntBASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Gm15707-201ENSMUST00000118804 996 ntBASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Gm8019-201ENSMUST00000119317 587 ntBASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Gm12337-201ENSMUST00000119634 400 ntBASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Gm9574-201ENSMUST00000173127 845 ntBASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Mir6387-201ENSMUST00000184042 108 ntBASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Gm6518-201ENSMUST00000208450 342 ntBASIC11.71□□□□□ -0.54
Col4a6B1AVK5 AC158986.2-201ENSMUST00000227487 618 ntBASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Col4a6B1AVK5 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col4a6B1AVK5 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Gm14592-201ENSMUST00000117201 560 ntBASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Gm8601-201ENSMUST00000182096 909 ntBASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Gm36982-201ENSMUST00000193796 1128 ntBASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Gm19918-201ENSMUST00000194858 400 ntBASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Gm43244-201ENSMUST00000196994 1285 ntBASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.7□□□□□ -0.54
Col4a6B1AVK5 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Gm4930-201ENSMUST00000219926 1087 ntBASIC11.7□□□□□ -0.54
Col4a6B1AVK5 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC11.7□□□□□ -0.54
Col4a6B1AVK5 Gm42432-201ENSMUST00000197902 1617 ntBASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Mir1249-201ENSMUST00000116791 98 ntBASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Gm8234-201ENSMUST00000198523 1107 ntBASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Gm44498-201ENSMUST00000199509 111 ntBASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 AC121357.1-201ENSMUST00000227365 608 ntBASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col4a6B1AVK5 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms