Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Mir483-201ENSMUST00000093631 73 ntBASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Scn3aA2ASI5 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Gm6390-201ENSMUST00000215034 589 ntBASIC12.8□□□□□ -0.36
Scn3aA2ASI5 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.8□□□□□ -0.36
Scn3aA2ASI5 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Gm14270-201ENSMUST00000118388 846 ntBASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Gm17070-201ENSMUST00000170463 784 ntBASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Gm42867-201ENSMUST00000202995 469 ntBASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Capsl-202ENSMUST00000226688 739 ntBASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn3aA2ASI5 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Gm8420-201ENSMUST00000097103 598 ntBASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Scn3aA2ASI5 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn3aA2ASI5 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms