Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm7812-201ENSMUST00000203479 874 ntBASIC5.93□□□□□ -1.46
Ubr4A2AN08 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Ubr4A2AN08 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ubr4A2AN08 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ubr4A2AN08 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm5764-201ENSMUST00000118817 885 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm6038-201ENSMUST00000154310 948 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm23822-201ENSMUST00000158739 128 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm7880-201ENSMUST00000203748 871 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Zscan5b-203ENSMUST00000165445 1407 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm13169-201ENSMUST00000122090 1459 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 Hmgn2-203ENSMUST00000102553 1265 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm12377-201ENSMUST00000118656 252 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm42851-201ENSMUST00000201325 1411 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm15528-201ENSMUST00000117821 864 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm14332-201ENSMUST00000121982 899 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm5435-201ENSMUST00000179295 1150 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm5274-201ENSMUST00000182641 1003 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 Mir6909-201ENSMUST00000184212 62 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm37160-201ENSMUST00000193081 1689 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm37861-201ENSMUST00000193534 2869 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm44892-201ENSMUST00000208595 488 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 E330011O21Rik-201ENSMUST00000209468 1107 ntTSL 5 BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm18122-201ENSMUST00000211390 904 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm4257-201ENSMUST00000222877 513 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 CT025547.1-201ENSMUST00000225127 578 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 Gm8420-201ENSMUST00000097103 598 ntBASIC5.92□□□□□ -1.46
Ubr4A2AN08 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ubr4A2AN08 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms