Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Gm8018-201ENSMUST00000173536 789 ntBASIC12.15□□□□□ -0.46
Speer3W4VSP1 Gm8902-201ENSMUST00000174341 1096 ntBASIC12.15□□□□□ -0.46
Speer3W4VSP1 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Speer3W4VSP1 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Speer3W4VSP1 Gm37424-201ENSMUST00000191727 561 ntBASIC12.15□□□□□ -0.46
Speer3W4VSP1 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Speer3W4VSP1 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.15□□□□□ -0.46
Speer3W4VSP1 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Speer3W4VSP1 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.15□□□□□ -0.46
Speer3W4VSP1 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
Speer3W4VSP1 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.15□□□□□ -0.46
Speer3W4VSP1 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Speer3W4VSP1 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Speer3W4VSP1 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Speer3W4VSP1 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Speer3W4VSP1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Speer3W4VSP1 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Speer3W4VSP1 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.15□□□□□ -0.46
Speer3W4VSP1 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Speer3W4VSP1 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Speer3W4VSP1 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Speer3W4VSP1 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.15□□□□□ -0.47
Speer3W4VSP1 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Speer3W4VSP1 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Gm24548-201ENSMUST00000158650 108 ntBASIC12.14□□□□□ -0.47
Speer3W4VSP1 Gm36966-201ENSMUST00000192217 413 ntBASIC12.14□□□□□ -0.47
Speer3W4VSP1 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC12.14□□□□□ -0.47
Speer3W4VSP1 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC12.14□□□□□ -0.47
Speer3W4VSP1 Gm44823-201ENSMUST00000204775 1107 ntBASIC12.14□□□□□ -0.47
Speer3W4VSP1 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Gm18329-201ENSMUST00000215832 589 ntBASIC12.14□□□□□ -0.47
Speer3W4VSP1 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.14□□□□□ -0.47
Speer3W4VSP1 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Speer3W4VSP1 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Gm5187-201ENSMUST00000117317 991 ntBASIC12.13□□□□□ -0.47
Speer3W4VSP1 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC12.13□□□□□ -0.47
Speer3W4VSP1 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Gm37489-201ENSMUST00000191883 159 ntBASIC12.13□□□□□ -0.47
Speer3W4VSP1 Gm43133-201ENSMUST00000197472 463 ntBASIC12.13□□□□□ -0.47
Speer3W4VSP1 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Zfp850-201ENSMUST00000099111 941 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms