Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Gm11439-201ENSMUST00000118598 409 ntBASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Gm14277-201ENSMUST00000121195 360 ntBASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Gm38151-201ENSMUST00000195085 289 ntBASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Gm43966-201ENSMUST00000203301 612 ntBASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb2S4R1M3 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Gm12501-201ENSMUST00000119163 529 ntBASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Gm23085-201ENSMUST00000157849 293 ntBASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Gm2383-201ENSMUST00000181461 807 ntBASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.57□□□□□ -0.56
H2afb2S4R1M3 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.57□□□□□ -0.56
H2afb2S4R1M3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb2S4R1M3 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms